RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 GORABQ5T7V8 394 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 DDX46Q7L014 1031 aaKnown RBP21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 HSCBQ8IWL3 235 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 RUFY2Q8WXA3 655 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 RGS17Q9UGC6 210 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 TAF1P21675 1872 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 TNS1Q9HBL0 1735 aaKnown RBP21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 NMIQ13287 307 aaPredicted RBP21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 PROM2Q8N271 834 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
CHRNA4-206ENST00000498043 HIP1O00291 1037 aa21.55■■□□□ 1.04
CHRNA4-206ENST00000498043 CCDC24Q8N4L8 307 aa21.55■■□□□ 1.04
CHRNA4-206ENST00000498043 TNRC6CQ9HCJ0 1690 aaKnown RBP21.55■■□□□ 1.04
CHRNA4-206ENST00000498043 MROH5Q6ZUA9 1318 aa21.55■■□□□ 1.04
CHRNA4-206ENST00000498043 PDE8BO95263 885 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 IFIT1P09914 478 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 MCCP23508 829 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 IGHMBP2P38935 993 aaKnown RBP21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 TTC39AQ5SRH9 613 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 HELBQ8NG08 1087 aaPredicted RBP21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 RAD50Q92878 1312 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 CARMIL3Q8ND23 1372 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 A0A0D9SFI3 127 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 GOLIM4O00461 696 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 APBA3O96018 575 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
CHRNA4-206ENST00000498043 CD2BP2O95400 341 aaKnown RBP21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 RABEP1Q15276 862 aa21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 POTEAQ6S8J7 498 aa21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 LSG1Q9H089 658 aaKnown RBP21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 PAG1Q9NWQ8 432 aa21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 PALD1Q9ULE6 856 aa21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 A0A1B0GUL6 1792 aa21.53■■□□□ 1.04
CHRNA4-206ENST00000498043 NPHP1O15259 732 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 SSFA2P28290 1259 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 SNX21Q969T3 373 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 RFX7Q2KHR2 1363 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 NFIXQ14938 502 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 SF3B3Q15393 1217 aaKnown RBP21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 PUM3Q15397 648 aaKnown RBP21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 TPTE2Q6XPS3 522 aa21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 CDC5LQ99459 802 aaKnown RBP21.52■■□□□ 1.04
CHRNA4-206ENST00000498043 SLC10A5Q5PT55 438 aa21.51■■□□□ 1.03
CHRNA4-206ENST00000498043 FBXO41Q8TF61 875 aa21.51■■□□□ 1.03
CHRNA4-206ENST00000498043 CHGBP05060 677 aa21.51■■□□□ 1.03
CHRNA4-206ENST00000498043 KBTBD3Q8NAB2 608 aa21.51■■□□□ 1.03
CHRNA4-206ENST00000498043 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
CHRNA4-206ENST00000498043 TAF5LO75529 589 aa21.5■■□□□ 1.03
CHRNA4-206ENST00000498043 SCARF1Q14162 830 aa21.5■■□□□ 1.03
CHRNA4-206ENST00000498043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHRNA4-206ENST00000498043 PLSCR1O15162 318 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 EPB41L2O43491 1005 aaKnown RBP21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 GYS1P13807 737 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 FKBP4Q02790 459 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 ANKRD18AQ8IVF6 992 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 SLKQ9H2G2 1235 aaPredicted RBP21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 MED23Q9ULK4 1368 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 SNAP23O00161 211 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 HSPA4P34932 840 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 PTH1RQ03431 593 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 NLRP3Q96P20 1036 aa21.49■■□□□ 1.03
CHRNA4-206ENST00000498043 FGFR2P21802 821 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 PI16Q6UXB8 463 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 LPIN2Q92539 896 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 ANTXR1Q9H6X2 564 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 CCDC171Q6TFL3 1326 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 CHRNDQ07001 517 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 ZNF589Q86UQ0 364 aaPredicted RBP21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 CNBD1Q8NA66 436 aa21.48■■□□□ 1.03
CHRNA4-206ENST00000498043 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
CHRNA4-206ENST00000498043 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
CHRNA4-206ENST00000498043 SLC5A1P13866 664 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 ANAPC15P60006 121 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 TFCP2L1Q9NZI6 479 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 MCAMP43121 646 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 PHKA1P46020 1223 aa21.46■■□□□ 1.03
CHRNA4-206ENST00000498043 K7ELQ4 463 aaPredicted RBP21.45■■□□□ 1.02
CHRNA4-206ENST00000498043 ZAP70P43403 619 aa21.45■■□□□ 1.02
CHRNA4-206ENST00000498043 SLFNL1Q499Z3 407 aa21.45■■□□□ 1.02
CHRNA4-206ENST00000498043 CCDC102BQ68D86 513 aa21.45■■□□□ 1.02
CHRNA4-206ENST00000498043 SEC62Q99442 399 aaKnown RBP21.45■■□□□ 1.02
CHRNA4-206ENST00000498043 MYH7P12883 1935 aa21.44■■□□□ 1.02
CHRNA4-206ENST00000498043 ST18O60284 1047 aa21.44■■□□□ 1.02
CHRNA4-206ENST00000498043 PRR5LQ6MZQ0 368 aa21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 CCDC129Q6ZRS4 1044 aa21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 BSDC1Q9NW68 430 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 RBM8AQ9Y5S9 174 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
CHRNA4-206ENST00000498043 ARID4AP29374 1257 aaPredicted RBP21.42■■□□□ 1.02
CHRNA4-206ENST00000498043 KCNJ4P48050 445 aa21.42■■□□□ 1.02
CHRNA4-206ENST00000498043 NEK4P51957 841 aa21.42■■□□□ 1.02
CHRNA4-206ENST00000498043 PRPF40BQ6NWY9 871 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-206ENST00000498043 RASEFQ8IZ41 740 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms