RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 XKR5Q6UX68 686 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 DHX32Q7L7V1 743 aaKnown RBP5.31□□□□□ -1.56
RIF1-212ENST00000498041 NBPF11Q86T75 865 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 HOMEZQ8IX15 550 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 GGNBP2Q9H3C7 697 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 TPSG1Q9NRR2 321 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 CCDC87Q9NVE4 849 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 DNAJB12Q9NXW2 375 aaKnown RBP5.31□□□□□ -1.56
RIF1-212ENST00000498041 TLR7Q9NYK1 1049 aaKnown RBP5.31□□□□□ -1.56
RIF1-212ENST00000498041 BRPF3Q9ULD4 1205 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 NDUFB5O43674 189 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 MMP20O60882 483 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 NRLP54845 237 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 PLAURQ03405 335 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 EHHADHQ08426 723 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 RSPO4Q2I0M5 234 aaPredicted RBP5.3□□□□□ -1.56
RIF1-212ENST00000498041 TTC39BQ5VTQ0 682 aaPredicted RBP5.3□□□□□ -1.56
RIF1-212ENST00000498041 ZNF438Q7Z4V0 828 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 TRPM4Q8TD43 1214 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 ELP3Q9H9T3 547 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
RIF1-212ENST00000498041 SLC6A14Q9UN76 642 aa5.3□□□□□ -1.56
RIF1-212ENST00000498041 SPDYE3A6NKU9 549 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 SOX18P35713 384 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 GPLD1P80108 840 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 GRIK4Q16099 956 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 FOXD4L6Q3SYB3 417 aaPredicted RBP5.29□□□□□ -1.56
RIF1-212ENST00000498041 FOXD4L3Q6VB84 417 aaPredicted RBP5.29□□□□□ -1.56
RIF1-212ENST00000498041 C8orf86Q6ZUL3 223 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 GJD3Q8N144 294 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 OR13H1Q8NG92 308 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 CITED4Q96RK1 184 aa5.29□□□□□ -1.56
RIF1-212ENST00000498041 ABI2Q9NYB9 513 aaPredicted RBP5.29□□□□□ -1.56
RIF1-212ENST00000498041 A6NHS1 94 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 ZBTB42B2RXF5 422 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 M0R082 166 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 HOXD8P13378 290 aaPredicted RBP5.28□□□□□ -1.56
RIF1-212ENST00000498041 FAM35AQ86V20 835 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 ZNF417Q8TAU3 575 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 ZNF587Q96SQ5 575 aaPredicted RBP5.28□□□□□ -1.56
RIF1-212ENST00000498041 ZFP64Q9NPA5 681 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 STARD13Q9Y3M8 1113 aa5.28□□□□□ -1.56
RIF1-212ENST00000498041 LOC102724428A0A0B4J2F2 783 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 DYRK3O43781 588 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 SIK1P57059 783 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 MLLT1Q03111 559 aaPredicted RBP5.27□□□□□ -1.57
RIF1-212ENST00000498041 TRIM28Q13263 835 aaKnown RBP5.27□□□□□ -1.57
RIF1-212ENST00000498041 PDE3BQ13370 1112 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 PRSS36Q5K4E3 855 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 MICALL1Q8N3F8 863 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 PMEPA1Q969W9 287 aa5.27□□□□□ -1.57
RIF1-212ENST00000498041 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 ALBP02768 609 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 CPB1P15086 417 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 HYAL2Q12891 473 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 NKAPLQ5M9Q1 402 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 TRAPPC3LQ5T215 181 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 PSAPL1Q6NUJ1 521 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 C20orf204Q6ZNR8 217 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 HFE2Q6ZVN8 426 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 C1orf127Q8N9H9 656 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 TMC1Q8TDI8 760 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 SNX29Q8TEQ0 813 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 NSUN5Q96P11 429 aaKnown RBP5.26□□□□□ -1.57
RIF1-212ENST00000498041 RBCK1Q9BYM8 510 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 RBSNQ9H1K0 784 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 PRDM6Q9NQX0 595 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 FRRS1LQ9P0K9 344 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 CNTN3Q9P232 1028 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 DCTN4Q9UJW0 460 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 NAGPAQ9UK23 515 aa5.26□□□□□ -1.57
RIF1-212ENST00000498041 J3QW42 95 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 LILRB5O75023 590 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 PHACTR2O75167 634 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 RGS9O75916 674 aaPredicted RBP5.25□□□□□ -1.57
RIF1-212ENST00000498041 GHRHP01286 108 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 CYP2E1P05181 493 aaPredicted RBP5.25□□□□□ -1.57
RIF1-212ENST00000498041 NEFLP07196 543 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 EIF2AK2P19525 551 aaKnown RBP5.25□□□□□ -1.57
RIF1-212ENST00000498041 CES1P23141 567 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 PERM1Q5SV97 790 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 ELMSAN1Q6PJG2 1045 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 NUDT8Q8WV74 236 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 SPACA7Q96KW9 195 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 FAM129BQ96TA1 746 aa5.25□□□□□ -1.57
RIF1-212ENST00000498041 JPH1Q9HDC5 661 aaPredicted RBP5.25□□□□□ -1.57
RIF1-212ENST00000498041 KIF4AO95239 1232 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 MAPK1P28482 360 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 ARTNQ5T4W7 220 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 COL13A1Q5TAT6 717 aaPredicted RBP5.24□□□□□ -1.57
RIF1-212ENST00000498041 SND1Q7KZF4 910 aaKnown RBP eCLIP5.24□□□□□ -1.57
RIF1-212ENST00000498041 NCAPG2Q86XI2 1143 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 TTC9Q92623 222 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 DMRTB1Q96MA1 342 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 LPIN3Q9BQK8 851 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 CHRDQ9H2X0 955 aa5.24□□□□□ -1.57
RIF1-212ENST00000498041 FOXD3Q9UJU5 478 aaPredicted RBP5.24□□□□□ -1.57
RIF1-212ENST00000498041 PLD4Q96BZ4 506 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms