RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 POLLQ9UGP5 575 aa15.1■□□□□ 0.01
NUDCD3-211ENST00000497978 CNOT7Q9UIV1 285 aaKnown RBP15.1■□□□□ 0.01
NUDCD3-211ENST00000497978 IL16Q14005 1332 aa15.1■□□□□ 0.01
NUDCD3-211ENST00000497978 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 G3V3G9 751 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 TBC1D16Q8TBP0 767 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 ZC3H12CQ9C0D7 883 aaKnown RBP15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 DBNDD1Q9H9R9 158 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
NUDCD3-211ENST00000497978 TRAF5O00463 557 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 ECE2O60344 883 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 PAXIP1Q6ZW49 1069 aaPredicted RBP15.08■□□□□ 0
NUDCD3-211ENST00000497978 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 MICALL2Q8IY33 904 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 DPF2Q92785 391 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
NUDCD3-211ENST00000497978 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 GGA1Q9UJY5 639 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
NUDCD3-211ENST00000497978 TRPM7Q96QT4 1865 aa15.08■□□□□ 0
NUDCD3-211ENST00000497978 PSMD14O00487 310 aa15.07■□□□□ 0
NUDCD3-211ENST00000497978 UFL1O94874 794 aa15.07■□□□□ 0
NUDCD3-211ENST00000497978 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
NUDCD3-211ENST00000497978 ECE1P42892 770 aa15.07■□□□□ 0
NUDCD3-211ENST00000497978 FMR1Q06787 632 aaKnown RBP eCLIP15.07■□□□□ 0
NUDCD3-211ENST00000497978 DOK7Q18PE1 504 aa15.07■□□□□ 0
NUDCD3-211ENST00000497978 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
NUDCD3-211ENST00000497978 CDC5LQ99459 802 aaKnown RBP15.07■□□□□ 0
NUDCD3-211ENST00000497978 PGAP2Q9UHJ9 254 aa15.07■□□□□ 0
NUDCD3-211ENST00000497978 FOXN1O15353 648 aa15.06■□□□□ 0
NUDCD3-211ENST00000497978 CTCFP49711 727 aaPredicted RBP15.06■□□□□ 0
NUDCD3-211ENST00000497978 CTSWP56202 376 aa15.06■□□□□ 0
NUDCD3-211ENST00000497978 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
NUDCD3-211ENST00000497978 CST9Q5W186 159 aa15.06■□□□□ 0
NUDCD3-211ENST00000497978 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
NUDCD3-211ENST00000497978 COL4A1P02462 1669 aa15.06■□□□□ 0
NUDCD3-211ENST00000497978 CELF2O95319 508 aaKnown RBP15.05■□□□□ -0
NUDCD3-211ENST00000497978 IGKV5-2P06315 115 aa15.05■□□□□ -0
NUDCD3-211ENST00000497978 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
NUDCD3-211ENST00000497978 WDR63Q8IWG1 891 aa15.05■□□□□ -0
NUDCD3-211ENST00000497978 TRPM4Q8TD43 1214 aa15.05■□□□□ -0
NUDCD3-211ENST00000497978 GPR101Q96P66 508 aaPredicted RBP15.05■□□□□ -0
NUDCD3-211ENST00000497978 GLIS2Q9BZE0 524 aaPredicted RBP15.05■□□□□ -0
NUDCD3-211ENST00000497978 WBP1LQ9NX94 342 aa15.05■□□□□ -0
NUDCD3-211ENST00000497978 TLL2Q9Y6L7 1015 aa15.05■□□□□ -0
NUDCD3-211ENST00000497978 XDHP47989 1333 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 FANCIQ9NVI1 1328 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 ATP2B4P23634 1241 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 GRM1Q13255 1194 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 CWF19L2Q2TBE0 894 aaKnown RBP15.04■□□□□ -0
NUDCD3-211ENST00000497978 CAPNS2Q96L46 248 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
NUDCD3-211ENST00000497978 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
NUDCD3-211ENST00000497978 SHTN1A0MZ66 631 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 FLIIQ13045 1269 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 FKBP5Q13451 457 aaPredicted RBP15.03■□□□□ -0
NUDCD3-211ENST00000497978 G2E3Q7L622 706 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 SAMD7Q7Z3H4 446 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 ZNF408Q9H9D4 720 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
NUDCD3-211ENST00000497978 MYH3P11055 1940 aa15.02■□□□□ -0
NUDCD3-211ENST00000497978 RTL9Q8NET4 1388 aa15.02■□□□□ -0
NUDCD3-211ENST00000497978 PCNTO95613 3336 aa15.02■□□□□ -0
NUDCD3-211ENST00000497978 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
NUDCD3-211ENST00000497978 TBC1D10BQ4KMP7 808 aaPredicted RBP15.02■□□□□ -0
NUDCD3-211ENST00000497978 CYP4F22Q6NT55 531 aa15.02■□□□□ -0
NUDCD3-211ENST00000497978 UBE3BQ7Z3V4 1068 aa15.02■□□□□ -0
NUDCD3-211ENST00000497978 BSDC1Q9NW68 430 aaPredicted RBP15.02■□□□□ -0
NUDCD3-211ENST00000497978 CACNA1FO60840 1977 aa15.02□□□□□ -0.01
NUDCD3-211ENST00000497978 H7C1W4 665 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 GCKRQ14397 625 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 SAPCD2Q86UD0 394 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 DNAAF4Q8WXU2 420 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 HHIPL1Q96JK4 782 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 GREM2Q9H772 168 aa15.01□□□□□ -0.01
NUDCD3-211ENST00000497978 VAMP4O75379 141 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 MAP2K2P36507 400 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 IGHMBP2P38935 993 aaKnown RBP15□□□□□ -0.01
NUDCD3-211ENST00000497978 LBX1P52954 281 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 EXOSC9Q06265 439 aaKnown RBP15□□□□□ -0.01
NUDCD3-211ENST00000497978 KIF4BQ2VIQ3 1234 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 LINS1Q8NG48 757 aa15□□□□□ -0.01
NUDCD3-211ENST00000497978 RSBN1LQ6PCB5 846 aaPredicted RBP14.99□□□□□ -0.01
NUDCD3-211ENST00000497978 PODNQ7Z5L7 613 aa14.99□□□□□ -0.01
NUDCD3-211ENST00000497978 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
NUDCD3-211ENST00000497978 AGBL3Q8NEM8 1001 aa14.99□□□□□ -0.01
NUDCD3-211ENST00000497978 PLA2G12BQ9BX93 195 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms