RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CPB1P15086 417 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 SOX18P35713 384 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 ADGRE1Q14246 886 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 MBTPS1Q14703 1052 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 NAA30Q147X3 362 aaPredicted RBP6.53□□□□□ -1.36
PSPC1-205ENST00000497722 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 CMTR1Q8N1G2 835 aaKnown RBP6.53□□□□□ -1.36
PSPC1-205ENST00000497722 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
PSPC1-205ENST00000497722 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 FMR1NBQ8N0W7 255 aaPredicted RBP6.52□□□□□ -1.37
PSPC1-205ENST00000497722 CCDC82Q8N4S0 544 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 STIM2Q9P246 746 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 SEPT3Q9UH03 358 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
PSPC1-205ENST00000497722 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
PSPC1-205ENST00000497722 NLRP13Q86W25 1043 aa6.51□□□□□ -1.37
PSPC1-205ENST00000497722 DMRTC2Q8IXT2 367 aaPredicted RBP6.51□□□□□ -1.37
PSPC1-205ENST00000497722 LENG1Q96BZ8 264 aaPredicted RBP6.51□□□□□ -1.37
PSPC1-205ENST00000497722 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
PSPC1-205ENST00000497722 ZAP70P43403 619 aa6.5□□□□□ -1.37
PSPC1-205ENST00000497722 SIK1P57059 783 aa6.5□□□□□ -1.37
PSPC1-205ENST00000497722 DTWD1Q8N5C7 304 aa6.5□□□□□ -1.37
PSPC1-205ENST00000497722 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
PSPC1-205ENST00000497722 J3QW42 95 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 PPP1R15AO75807 674 aaPredicted RBP6.49□□□□□ -1.37
PSPC1-205ENST00000497722 SCNN1AP37088 669 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 FZD5Q13467 585 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 ELMSAN1Q6PJG2 1045 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 SHISA2Q6UWI4 295 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 FBXO11Q86XK2 927 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 TP53INP1Q96A56 240 aa6.49□□□□□ -1.37
PSPC1-205ENST00000497722 SMG9Q9H0W8 520 aaKnown RBP6.49□□□□□ -1.37
PSPC1-205ENST00000497722 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
PSPC1-205ENST00000497722 PSAPP07602 524 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 SSFA2P28290 1259 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
PSPC1-205ENST00000497722 IRAK1P51617 712 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 RAC1P63000 192 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
PSPC1-205ENST00000497722 PIK3R5Q8WYR1 880 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
PSPC1-205ENST00000497722 PCMTD2Q9NV79 361 aa6.48□□□□□ -1.37
PSPC1-205ENST00000497722 UBAP1LF5GYI3 381 aa6.47□□□□□ -1.37
PSPC1-205ENST00000497722 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
PSPC1-205ENST00000497722 ABTB2Q8N961 1025 aa6.47□□□□□ -1.37
PSPC1-205ENST00000497722 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
PSPC1-205ENST00000497722 FAM13BQ9NYF5 915 aa6.47□□□□□ -1.37
PSPC1-205ENST00000497722 KIF4AO95239 1232 aa6.46□□□□□ -1.38
PSPC1-205ENST00000497722 EIF2AK2P19525 551 aaKnown RBP6.46□□□□□ -1.38
PSPC1-205ENST00000497722 WFDC8Q8IUA0 241 aa6.46□□□□□ -1.38
PSPC1-205ENST00000497722 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
PSPC1-205ENST00000497722 NSUN5Q96P11 429 aaKnown RBP6.46□□□□□ -1.38
PSPC1-205ENST00000497722 TIMELESSQ9UNS1 1208 aa6.46□□□□□ -1.38
PSPC1-205ENST00000497722 DLL1O00548 723 aa6.45□□□□□ -1.38
PSPC1-205ENST00000497722 TM4SF5O14894 197 aa6.45□□□□□ -1.38
PSPC1-205ENST00000497722 NPR3P17342 541 aa6.45□□□□□ -1.38
PSPC1-205ENST00000497722 ATCAYQ86WG3 371 aa6.45□□□□□ -1.38
PSPC1-205ENST00000497722 XKR5Q6UX68 686 aa6.44□□□□□ -1.38
PSPC1-205ENST00000497722 ADAMTSL4Q6UY14 1074 aa6.44□□□□□ -1.38
PSPC1-205ENST00000497722 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
PSPC1-205ENST00000497722 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
PSPC1-205ENST00000497722 SETDB1Q15047 1291 aa6.43□□□□□ -1.38
PSPC1-205ENST00000497722 PDE12Q6L8Q7 609 aaKnown RBP6.43□□□□□ -1.38
PSPC1-205ENST00000497722 IGF2-ASQ6U949 168 aa6.43□□□□□ -1.38
PSPC1-205ENST00000497722 GTF3C2Q8WUA4 911 aaPredicted RBP6.43□□□□□ -1.38
PSPC1-205ENST00000497722 NUDT16Q96DE0 195 aaKnown RBP6.43□□□□□ -1.38
PSPC1-205ENST00000497722 ABI2Q9NYB9 513 aaPredicted RBP6.43□□□□□ -1.38
PSPC1-205ENST00000497722 TMEM63CQ9P1W3 806 aa6.43□□□□□ -1.38
PSPC1-205ENST00000497722 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
PSPC1-205ENST00000497722 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
PSPC1-205ENST00000497722 GHRHP01286 108 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 CEP120Q8N960 986 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 GGNBP2Q9H3C7 697 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 ELP3Q9H9T3 547 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 USP21Q9UK80 565 aa6.42□□□□□ -1.38
PSPC1-205ENST00000497722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.42□□□□□ -1.38
PSPC1-205ENST00000497722 CARNS1A5YM72 827 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 PDGFAP04085 211 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 NOS3P29474 1203 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 EIF1AXP47813 144 aaKnown RBP6.41□□□□□ -1.38
PSPC1-205ENST00000497722 ATP11AP98196 1134 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 HYAL2Q12891 473 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
PSPC1-205ENST00000497722 CACTIN-AS1Q8N1I8 211 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 IL22RA1Q8N6P7 574 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
PSPC1-205ENST00000497722 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
PSPC1-205ENST00000497722 MPSTP25325 297 aa6.4□□□□□ -1.38
PSPC1-205ENST00000497722 NOM1Q5C9Z4 860 aaKnown RBP6.4□□□□□ -1.38
PSPC1-205ENST00000497722 TTC39BQ5VTQ0 682 aaPredicted RBP6.4□□□□□ -1.38
PSPC1-205ENST00000497722 TMEM130Q8N3G9 435 aa6.4□□□□□ -1.38
PSPC1-205ENST00000497722 EDEM1Q92611 657 aa6.4□□□□□ -1.38
PSPC1-205ENST00000497722 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.38
PSPC1-205ENST00000497722 RBSNQ9H1K0 784 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms