RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ANKRD31	Q8N7Z5	1873 aa		7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	WNT7A	O00755	349 aa		7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	LINC01559	Q495D7	138 aa		7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	MRGPRX2	Q96LB1	330 aa		7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	DLG5	Q8TDM6	1919 aa		7.62	□□□□□ -1.19
UBE3C-208	ENST00000497368	ADCY9	O60503	1353 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	FAM187A	A6NFU0	413 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	F12	P00748	615 aa	Predicted RBP	7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	YBX3	P16989	372 aa	Known RBP eCLIP	7.61	□□□□□ -1.19	2e-8	■□□□□ 8.8
UBE3C-208	ENST00000497368	YY1	P25490	414 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	TNNT2	P45379	298 aa	Predicted RBP	7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	MSL1	Q68DK7	614 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	HELB	Q8NG08	1087 aa	Predicted RBP	7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	BAP1	Q92560	729 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	ASAP1	Q9ULH1	1129 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	PXDNL	A1KZ92	1463 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	C10orf71	Q711Q0	1435 aa		7.61	□□□□□ -1.19
UBE3C-208	ENST00000497368	IL13	P35225	146 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	WNT7B	P56706	349 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	RC3H1	Q5TC82	1133 aa	Known RBP	7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	MPRIP	Q6WCQ1	1025 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	CYP4X1	Q8N118	509 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	SLC16A10	Q8TF71	515 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	ATG3	Q9NT62	314 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	TOR4A	Q9NXH8	423 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	CEP350	Q5VT06	3117 aa		7.6	□□□□□ -1.19
UBE3C-208	ENST00000497368	LOC102724428	A0A0B4J2F2	783 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	PPM1G	O15355	546 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	SIK1	P57059	783 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	SH3BP2	P78314	561 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	CTDSPL2	Q05D32	466 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	PKDCC	Q504Y2	493 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	TRAF7	Q6Q0C0	670 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	POLR3GL	Q9BT43	218 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	TFCP2L1	Q9NZI6	479 aa		7.59	□□□□□ -1.19
UBE3C-208	ENST00000497368	LAMB4	A4D0S4	1761 aa		7.59	□□□□□ -1.2
UBE3C-208	ENST00000497368	KDM3B	Q7LBC6	1761 aa		7.59	□□□□□ -1.2
UBE3C-208	ENST00000497368	SBF1	O95248	1867 aa		7.58	□□□□□ -1.2
UBE3C-208	ENST00000497368	TTC24	A2A3L6	582 aa	Predicted RBP	7.58	□□□□□ -1.2
UBE3C-208	ENST00000497368	PPP2R2D	Q66LE6	453 aa		7.58	□□□□□ -1.2
UBE3C-208	ENST00000497368	CACNA1S	Q13698	1873 aa		7.58	□□□□□ -1.2
UBE3C-208	ENST00000497368	ARFGEF2	Q9Y6D5	1785 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	DGAT1	O75907	488 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	IFNL2	Q8IZJ0	200 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	ZNF511	Q8NB15	262 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	EHBP1	Q8NDI1	1231 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	CCER1	Q8TC90	406 aa	Predicted RBP	7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	LRRN4	Q8WUT4	740 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	SPG7	Q9UQ90	795 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	TIAM2	Q8IVF5	1701 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	NPC1L1	Q9UHC9	1359 aa		7.57	□□□□□ -1.2
UBE3C-208	ENST00000497368	CNTNAP4	Q9C0A0	1308 aa		7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368		J3QL48	77 aa		7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368	AP1G2	O75843	785 aa		7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368	SNIP1	Q8TAD8	396 aa	Known RBP	7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368	GOPC	Q9HD26	462 aa		7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368	TMOD3	Q9NYL9	352 aa		7.56	□□□□□ -1.2
UBE3C-208	ENST00000497368	SMPD1	P17405	629 aa		7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	SSFA2	P28290	1259 aa		7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	RFC5	P40937	340 aa		7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	SULT6B1	Q6IMI4	303 aa		7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	SMARCC1	Q92922	1105 aa	Predicted RBP	7.55	□□□□□ -1.2
UBE3C-208	ENST00000497368	ATP10D	Q9P241	1426 aa		7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	CCDC88A	Q3V6T2	1871 aa		7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	ERVV-2	B6SEH9	535 aa		7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	MORC1	Q86VD1	984 aa		7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	FOXJ1	Q92949	421 aa		7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.54	□□□□□ -1.2
UBE3C-208	ENST00000497368	ST8SIA5	O15466	376 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	SIAH2	O43255	324 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	ALDH1A1	P00352	501 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	GYS1	P13807	737 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	POLD1	P28340	1107 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	MTHFS	P49914	203 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	DDR1	Q08345	913 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	DCAF5	Q96JK2	942 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	LGR6	Q9HBX8	967 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	TLL2	Q9Y6L7	1015 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	CARMIL3	Q8ND23	1372 aa		7.53	□□□□□ -1.2
UBE3C-208	ENST00000497368	FER1L6	Q2WGJ9	1857 aa		7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	HMOX1	P09601	288 aa		7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	USP17L8	P0C7I0	530 aa		7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	NR6A1	Q15406	480 aa		7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	MTHFSD	Q2M296	383 aa	Known RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	INTS5	Q6P9B9	1019 aa	Known RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	HMX1	Q9NP08	348 aa	Predicted RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	SRP68	Q9UHB9	627 aa	Known RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	CD2AP	Q9Y5K6	639 aa		7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	DICER1	Q9UPY3	1922 aa	Known RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	SOS1	Q07889	1333 aa	Predicted RBP	7.52	□□□□□ -1.21
UBE3C-208	ENST00000497368	CEMIP	Q8WUJ3	1361 aa		7.51	□□□□□ -1.21
UBE3C-208	ENST00000497368	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.51	□□□□□ -1.21
UBE3C-208	ENST00000497368	C4orf48	Q5BLP8	95 aa		7.51	□□□□□ -1.21
UBE3C-208	ENST00000497368	CC2D1B	Q5T0F9	858 aa	Known RBP	7.51	□□□□□ -1.21
UBE3C-208	ENST00000497368	FLAD1	Q8NFF5	587 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms