RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 H7C1W4 665 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 F11P03951 625 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
ITGA6-211ENST00000497107 PHKA2P46019 1235 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 EPHA4P54764 986 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 TRIM22Q8IYM9 498 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 PANK3Q9H999 370 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 SLC52A1Q9NWF4 448 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
ITGA6-211ENST00000497107 MROH2AA6NES4 1674 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 PLA2G4AP47712 749 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 SRSF11Q05519 484 aaKnown RBP8.31□□□□□ -1.08
ITGA6-211ENST00000497107 DPYDQ12882 1025 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 RIPOR1Q6ZS17 1223 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 NLRP13Q86W25 1043 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 PNISRQ8TF01 805 aaKnown RBP8.31□□□□□ -1.08
ITGA6-211ENST00000497107 GAS2L1Q99501 681 aaPredicted RBP8.31□□□□□ -1.08
ITGA6-211ENST00000497107 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
ITGA6-211ENST00000497107 CABP1Q9NZU7 370 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
ITGA6-211ENST00000497107 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
ITGA6-211ENST00000497107 SLC9A9Q8IVB4 645 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 PGBD3Q8N328 593 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 PBXIP1Q96AQ6 731 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 CHMP3Q9Y3E7 222 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 REREQ9P2R6 1566 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 SETBP1Q9Y6X0 1596 aa8.3□□□□□ -1.08
ITGA6-211ENST00000497107 AGLP35573 1532 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
ITGA6-211ENST00000497107 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
ITGA6-211ENST00000497107 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 ELOAQ14241 798 aaKnown RBP8.29□□□□□ -1.08
ITGA6-211ENST00000497107 GAS6Q14393 721 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 TEAD4Q15561 434 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 FOXR1Q6PIV2 292 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
ITGA6-211ENST00000497107 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 ZDHHC3Q9NYG2 299 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
ITGA6-211ENST00000497107 KNSTRNQ9Y448 316 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 USP3Q9Y6I4 520 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 PPLO60437 1756 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 TSPOAP1O95153 1857 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 PIK3C2BO00750 1634 aa8.29□□□□□ -1.08
ITGA6-211ENST00000497107 SYNMO15061 1565 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 ATG7O95352 703 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 MSX1P28360 303 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 PSMA6P60900 246 aaKnown RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 SRPK2P78362 688 aaKnown RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 IDI1Q13907 227 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 AIDAQ96BJ3 306 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 PIK3C2GO75747 1445 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
ITGA6-211ENST00000497107 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
ITGA6-211ENST00000497107 LRPPRCP42704 1394 aaKnown RBP8.27□□□□□ -1.09
ITGA6-211ENST00000497107 SIGLEC1Q9BZZ2 1709 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 DBN1Q16643 649 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
ITGA6-211ENST00000497107 ERICH6BQ5W0A0 696 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 HINFPQ9BQA5 517 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 NUCKS1Q9H1E3 243 aaKnown RBP8.27□□□□□ -1.09
ITGA6-211ENST00000497107 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
ITGA6-211ENST00000497107 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 ZFYVE9O95405 1425 aa8.27□□□□□ -1.09
ITGA6-211ENST00000497107 KDM5AP29375 1690 aaKnown RBP8.27□□□□□ -1.09
ITGA6-211ENST00000497107 MYO3AQ8NEV4 1616 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 NOS2P35228 1153 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 PSMG3-AS1Q96PY0 264 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
ITGA6-211ENST00000497107 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
ITGA6-211ENST00000497107 INSRP06213 1382 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 PREX1Q8TCU6 1659 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 PHF20L1A8MW92 1017 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
ITGA6-211ENST00000497107 STAG2Q8N3U4 1231 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 TRERF1Q96PN7 1200 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
ITGA6-211ENST00000497107 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
ITGA6-211ENST00000497107 ERVK-7P63135 1459 aa8.25□□□□□ -1.09
ITGA6-211ENST00000497107 NEXMIFQ5QGS0 1516 aa8.24□□□□□ -1.09
ITGA6-211ENST00000497107 ASXL1Q8IXJ9 1541 aa8.24□□□□□ -1.09
ITGA6-211ENST00000497107 SMG6Q86US8 1419 aaKnown RBP8.24□□□□□ -1.09
ITGA6-211ENST00000497107 PPP1R12BO60237 982 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms