RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
TRIM4-205ENST00000496896 ALKBH2Q6NS38 261 aa8.33□□□□□ -1.08
TRIM4-205ENST00000496896 FAM35AQ86V20 835 aa8.33□□□□□ -1.08
TRIM4-205ENST00000496896 ARID3AQ99856 593 aa8.33□□□□□ -1.08
TRIM4-205ENST00000496896 MMP20O60882 483 aa8.32□□□□□ -1.08
TRIM4-205ENST00000496896 NOM1Q5C9Z4 860 aaKnown RBP8.32□□□□□ -1.08
TRIM4-205ENST00000496896 PDE12Q6L8Q7 609 aaKnown RBP8.32□□□□□ -1.08
TRIM4-205ENST00000496896 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
TRIM4-205ENST00000496896 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
TRIM4-205ENST00000496896 GPR152Q8TDT2 470 aa8.32□□□□□ -1.08
TRIM4-205ENST00000496896 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
TRIM4-205ENST00000496896 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
TRIM4-205ENST00000496896 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
TRIM4-205ENST00000496896 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
TRIM4-205ENST00000496896 FAM13AO94988 1023 aa8.31□□□□□ -1.08
TRIM4-205ENST00000496896 SCNN1AP37088 669 aa8.31□□□□□ -1.08
TRIM4-205ENST00000496896 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
TRIM4-205ENST00000496896 CARNS1A5YM72 827 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 PCSK2P16519 638 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-205ENST00000496896 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
TRIM4-205ENST00000496896 AFF1P51825 1210 aaKnown RBP8.3□□□□□ -1.08
TRIM4-205ENST00000496896 TRIM28Q13263 835 aaKnown RBP8.3□□□□□ -1.08
TRIM4-205ENST00000496896 PERM1Q5SV97 790 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 XKR5Q6UX68 686 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 RETREG2Q8NC44 543 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 OR13H1Q8NG92 308 aa8.3□□□□□ -1.08
TRIM4-205ENST00000496896 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
TRIM4-205ENST00000496896 CPB1P15086 417 aa8.29□□□□□ -1.08
TRIM4-205ENST00000496896 MPSTP25325 297 aa8.29□□□□□ -1.08
TRIM4-205ENST00000496896 SIK1P57059 783 aa8.29□□□□□ -1.08
TRIM4-205ENST00000496896 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRIM4-205ENST00000496896 ELMSAN1Q6PJG2 1045 aa8.29□□□□□ -1.08
TRIM4-205ENST00000496896 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
TRIM4-205ENST00000496896 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
TRIM4-205ENST00000496896 NUDT8Q8WV74 236 aa8.28□□□□□ -1.08
TRIM4-205ENST00000496896 ABI2Q9NYB9 513 aaPredicted RBP8.28□□□□□ -1.08
TRIM4-205ENST00000496896 PDGFAP04085 211 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 USP5P45974 858 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 GRIK4Q16099 956 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 GRIK5Q16478 980 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
TRIM4-205ENST00000496896 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 CACTIN-AS1Q8N1I8 211 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 DTWD1Q8N5C7 304 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
TRIM4-205ENST00000496896 KIF4AO95239 1232 aa8.26□□□□□ -1.09
TRIM4-205ENST00000496896 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
TRIM4-205ENST00000496896 MLLT1Q03111 559 aaPredicted RBP8.26□□□□□ -1.09
TRIM4-205ENST00000496896 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
TRIM4-205ENST00000496896 EDEM1Q92611 657 aa8.26□□□□□ -1.09
TRIM4-205ENST00000496896 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
TRIM4-205ENST00000496896 A0A0A0MRY4 1105 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 C9orf172C9J069 976 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 GHRHP01286 108 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 ELNP15502 786 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 RAC1P63000 192 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
TRIM4-205ENST00000496896 EHHADHQ08426 723 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 HYAL2Q12891 473 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 MTMR3Q13615 1198 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
TRIM4-205ENST00000496896 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
TRIM4-205ENST00000496896 ICMTO60725 284 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 COBLO75128 1261 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 ADGRE1Q14246 886 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 HFE2Q6ZVN8 426 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 ZNF438Q7Z4V0 828 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 TTC16Q8NEE8 873 aa8.24□□□□□ -1.09
TRIM4-205ENST00000496896 NSUN5Q96P11 429 aaKnown RBP8.24□□□□□ -1.09
TRIM4-205ENST00000496896 ABL1P00519 1130 aa8.23□□□□□ -1.09
TRIM4-205ENST00000496896 MBTPS1Q14703 1052 aa8.23□□□□□ -1.09
TRIM4-205ENST00000496896 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
TRIM4-205ENST00000496896 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
TRIM4-205ENST00000496896 J3QW42 95 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 PAX4O43316 350 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 FZD6O60353 706 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 FMR1NBQ8N0W7 255 aaPredicted RBP8.22□□□□□ -1.09
TRIM4-205ENST00000496896 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 GGNBP2Q9H3C7 697 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 SRA1Q9HD15 236 aaKnown RBP8.22□□□□□ -1.09
TRIM4-205ENST00000496896 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
TRIM4-205ENST00000496896 ZNF211Q13398 564 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-205ENST00000496896 DMRTC2Q8IXT2 367 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-205ENST00000496896 GJD3Q8N144 294 aa8.21□□□□□ -1.1
TRIM4-205ENST00000496896 BRD1O95696 1058 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 TXKP42681 527 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 SERPINB4P48594 390 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 AAMPQ13685 434 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 ECM1Q16610 540 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 C8orf34Q49A92 452 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 COL13A1Q5TAT6 717 aaPredicted RBP8.2□□□□□ -1.1
TRIM4-205ENST00000496896 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 CEP120Q8N960 986 aa8.2□□□□□ -1.1
TRIM4-205ENST00000496896 DCAF11Q8TEB1 546 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms