RNA–Protein interactions for RNA: ENST00000496742.5

SSR2-213, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3 BASIC

Gene SSR2, Length 825 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-213ENST00000496742 PALD1Q9ULE6 856 aa11.63□□□□□ -0.55
SSR2-213ENST00000496742 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
SSR2-213ENST00000496742 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
SSR2-213ENST00000496742 CCDC171Q6TFL3 1326 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
SSR2-213ENST00000496742 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
SSR2-213ENST00000496742 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
SSR2-213ENST00000496742 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
SSR2-213ENST00000496742 KRT27Q7Z3Y8 459 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 KBTBD3Q8NAB2 608 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
SSR2-213ENST00000496742 NYXQ9GZU5 481 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 SNRKQ9NRH2 765 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 ABCC12Q96J65 1359 aa11.62□□□□□ -0.55
SSR2-213ENST00000496742 LRP5O75197 1615 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 GOLIM4O00461 696 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 ADORA1P30542 326 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 PTH1RQ03431 593 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
SSR2-213ENST00000496742 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
SSR2-213ENST00000496742 SNX14Q9Y5W7 946 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 MED23Q9ULK4 1368 aa11.61□□□□□ -0.55
SSR2-213ENST00000496742 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 PDE8BO95263 885 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 SLC5A1P13866 664 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 ZKSCAN1P17029 563 aaPredicted RBP11.6□□□□□ -0.55
SSR2-213ENST00000496742 PUM3Q15397 648 aaKnown RBP11.6□□□□□ -0.55
SSR2-213ENST00000496742 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 MCMDC2Q4G0Z9 681 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 TRAPPC3LQ5T215 181 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
SSR2-213ENST00000496742 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 HELLSQ9NRZ9 838 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 SRP68Q9UHB9 627 aaKnown RBP11.6□□□□□ -0.55
SSR2-213ENST00000496742 RBM8AQ9Y5S9 174 aaKnown RBP11.6□□□□□ -0.55
SSR2-213ENST00000496742 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
SSR2-213ENST00000496742 UQCRFS1P1P0C7P4 283 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 ADRA2BP18089 450 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 RFC4P35249 363 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 RBM6P78332 1123 aaKnown RBP11.59□□□□□ -0.55
SSR2-213ENST00000496742 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSR2-213ENST00000496742 SLC27A3Q5K4L6 730 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 NBPF5PQ86XG9 351 aaPredicted RBP11.59□□□□□ -0.55
SSR2-213ENST00000496742 VGLL2Q8N8G2 317 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 LPIN2Q92539 896 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
SSR2-213ENST00000496742 MAP4K1Q92918 833 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 KCNB2Q92953 911 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
SSR2-213ENST00000496742 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
SSR2-213ENST00000496742 SRCAPQ6ZRS2 3230 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 SSFA2P28290 1259 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 DDIT3P35638 169 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 SLC10A5Q5PT55 438 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 CREB3L3Q68CJ9 461 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 TPTE2Q6XPS3 522 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 UPF3BQ9BZI7 483 aaKnown RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 TM6SF1Q9BZW5 370 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.56
SSR2-213ENST00000496742 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
SSR2-213ENST00000496742 MYH7P12883 1935 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 NPHP1O15259 732 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 TAF5LO75529 589 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 PHF14O94880 888 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 TRIM37O94972 964 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 FGFR2P21802 821 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 PSMA5P28066 241 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 TTF1Q15361 905 aaPredicted RBP11.57□□□□□ -0.56
SSR2-213ENST00000496742 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
SSR2-213ENST00000496742 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
SSR2-213ENST00000496742 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSR2-213ENST00000496742 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
SSR2-213ENST00000496742 SLC27A2O14975 620 aa11.56□□□□□ -0.56
SSR2-213ENST00000496742 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
SSR2-213ENST00000496742 CASTP20810 708 aaKnown RBP11.56□□□□□ -0.56
SSR2-213ENST00000496742 ZAP70P43403 619 aa11.56□□□□□ -0.56
SSR2-213ENST00000496742 ZSCAN25Q6NSZ9 544 aa11.56□□□□□ -0.56
SSR2-213ENST00000496742 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
SSR2-213ENST00000496742 TMX3Q96JJ7 454 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms