RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
CD46-218ENST00000496723 MMP20O60882 483 aa7.56□□□□□ -1.2
CD46-218ENST00000496723 COX20Q5RI15 118 aa7.56□□□□□ -1.2
CD46-218ENST00000496723 IL22RA1Q8N6P7 574 aa7.56□□□□□ -1.2
CD46-218ENST00000496723 KCNMB2Q9Y691 235 aa7.56□□□□□ -1.2
CD46-218ENST00000496723 J3QW42 95 aa7.55□□□□□ -1.2
CD46-218ENST00000496723 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
CD46-218ENST00000496723 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
CD46-218ENST00000496723 ACIN1Q9UKV3 1341 aaKnown RBP7.54□□□□□ -1.2
CD46-218ENST00000496723 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
CD46-218ENST00000496723 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
CD46-218ENST00000496723 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
CD46-218ENST00000496723 GDF6Q6KF10 455 aaPredicted RBP7.54□□□□□ -1.2
CD46-218ENST00000496723 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
CD46-218ENST00000496723 COL26A1Q96A83 441 aa7.54□□□□□ -1.2
CD46-218ENST00000496723 PBXIP1Q96AQ6 731 aa7.54□□□□□ -1.2
CD46-218ENST00000496723 FAM13BQ9NYF5 915 aa7.54□□□□□ -1.2
CD46-218ENST00000496723 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
CD46-218ENST00000496723 Q6ZS46 218 aa7.53□□□□□ -1.2
CD46-218ENST00000496723 NSUN5Q96P11 429 aaKnown RBP7.53□□□□□ -1.2
CD46-218ENST00000496723 ARID3AQ99856 593 aa7.53□□□□□ -1.2
CD46-218ENST00000496723 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
CD46-218ENST00000496723 FSTP19883 344 aa7.52□□□□□ -1.21
CD46-218ENST00000496723 C16orf46Q6P387 395 aa7.52□□□□□ -1.21
CD46-218ENST00000496723 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
CD46-218ENST00000496723 GSC2O15499 205 aa7.51□□□□□ -1.21
CD46-218ENST00000496723 ALX3O95076 343 aa7.51□□□□□ -1.21
CD46-218ENST00000496723 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
CD46-218ENST00000496723 ETFBKMTQ8IXQ9 262 aa7.51□□□□□ -1.21
CD46-218ENST00000496723 OR13H1Q8NG92 308 aa7.51□□□□□ -1.21
CD46-218ENST00000496723 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
CD46-218ENST00000496723 ATG7O95352 703 aa7.5□□□□□ -1.21
CD46-218ENST00000496723 OCLNQ16625 522 aa7.5□□□□□ -1.21
CD46-218ENST00000496723 PRIMPOLQ96LW4 560 aa7.5□□□□□ -1.21
CD46-218ENST00000496723 PCMTD2Q9NV79 361 aa7.5□□□□□ -1.21
CD46-218ENST00000496723 ZMIZ1Q9ULJ6 1067 aa7.5□□□□□ -1.21
CD46-218ENST00000496723 FNDC3AQ9Y2H6 1198 aaKnown RBP7.5□□□□□ -1.21
CD46-218ENST00000496723 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
CD46-218ENST00000496723 TRIP4Q15650 581 aaPredicted RBP7.49□□□□□ -1.21
CD46-218ENST00000496723 SPACA7Q96KW9 195 aa7.49□□□□□ -1.21
CD46-218ENST00000496723 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
CD46-218ENST00000496723 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
CD46-218ENST00000496723 UBAP1LF5GYI3 381 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 PRMT3O60678 531 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 GLB1P16278 677 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 HYAL2Q12891 473 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
CD46-218ENST00000496723 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 SAP130Q9H0E3 1048 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 RAXQ9Y2V3 346 aa7.48□□□□□ -1.21
CD46-218ENST00000496723 PPP1R15AO75807 674 aaPredicted RBP7.47□□□□□ -1.21
CD46-218ENST00000496723 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.212e-8■□□□□ 9.9
CD46-218ENST00000496723 CD97P48960 835 aa7.47□□□□□ -1.21
CD46-218ENST00000496723 FAM69CQ0P6D2 419 aa7.47□□□□□ -1.21
CD46-218ENST00000496723 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
CD46-218ENST00000496723 CEP41Q9BYV8 373 aa7.47□□□□□ -1.21
CD46-218ENST00000496723 DHX15O43143 795 aaKnown RBP7.46□□□□□ -1.22
CD46-218ENST00000496723 CD68P34810 354 aaPredicted RBP7.46□□□□□ -1.22
CD46-218ENST00000496723 UVSSAQ2YD98 709 aa7.46□□□□□ -1.22
CD46-218ENST00000496723 TTC39BQ5VTQ0 682 aaPredicted RBP7.46□□□□□ -1.22
CD46-218ENST00000496723 STOML1Q9UBI4 398 aa7.46□□□□□ -1.22
CD46-218ENST00000496723 TNFRSF10BO14763 440 aa7.45□□□□□ -1.22
CD46-218ENST00000496723 CDC27P30260 824 aa7.45□□□□□ -1.22
CD46-218ENST00000496723 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
CD46-218ENST00000496723 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
CD46-218ENST00000496723 AGGF1Q8N302 714 aaeCLIP7.45□□□□□ -1.22
CD46-218ENST00000496723 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
CD46-218ENST00000496723 UBL7Q96S82 380 aaPredicted RBP7.45□□□□□ -1.22
CD46-218ENST00000496723 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
CD46-218ENST00000496723 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
CD46-218ENST00000496723 LINC01387J3KSC0 135 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 IGLV1-40P01703 118 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 SCNN1AP37088 669 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 ZAP70P43403 619 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 FAM117BQ6P1L5 589 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 KLHL23Q8NBE8 558 aa7.44□□□□□ -1.22
CD46-218ENST00000496723 COBLO75128 1261 aa7.43□□□□□ -1.22
CD46-218ENST00000496723 KIF4AO95239 1232 aa7.43□□□□□ -1.22
CD46-218ENST00000496723 SSTR4P31391 388 aa7.43□□□□□ -1.22
CD46-218ENST00000496723 FAM26DQ5JW98 314 aa7.43□□□□□ -1.22
CD46-218ENST00000496723 COL13A1Q5TAT6 717 aaPredicted RBP7.43□□□□□ -1.22
CD46-218ENST00000496723 ABI2Q9NYB9 513 aaPredicted RBP7.43□□□□□ -1.22
CD46-218ENST00000496723 STIM2Q9P246 746 aa7.43□□□□□ -1.22
CD46-218ENST00000496723 ATP11AP98196 1134 aa7.42□□□□□ -1.22
CD46-218ENST00000496723 PDE12Q6L8Q7 609 aaKnown RBP7.42□□□□□ -1.22
CD46-218ENST00000496723 ABTB2Q8N961 1025 aa7.42□□□□□ -1.22
CD46-218ENST00000496723 PBX4Q9BYU1 374 aa7.42□□□□□ -1.22
CD46-218ENST00000496723 LACRTQ9GZZ8 138 aa7.42□□□□□ -1.22
CD46-218ENST00000496723 FAM177BA6PVY3 158 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 KIAA1324LA8MWY0 1029 aaPredicted RBP7.41□□□□□ -1.22
CD46-218ENST00000496723 TM4SF5O14894 197 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 FSCN2O14926 492 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 ACAD11Q709F0 780 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 CEP120Q8N960 986 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 FAM46AQ96IP4 442 aaKnown RBP7.41□□□□□ -1.22
CD46-218ENST00000496723 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 GOLGA2P5Q9HBQ8 144 aa7.41□□□□□ -1.22
CD46-218ENST00000496723 PAX4O43316 350 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms