RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
NPDC1-206ENST00000496498 GPC2Q8N158 579 aa22.69■■□□□ 1.22
NPDC1-206ENST00000496498 TBC1D16Q8TBP0 767 aa22.69■■□□□ 1.22
NPDC1-206ENST00000496498 SUCLG2Q96I99 432 aa22.69■■□□□ 1.22
NPDC1-206ENST00000496498 L3MBTL3Q96JM7 780 aaPredicted RBP22.69■■□□□ 1.22
NPDC1-206ENST00000496498 ZNRF3Q9ULT6 936 aa22.69■■□□□ 1.22
NPDC1-206ENST00000496498 CHMP3Q9Y3E7 222 aa22.69■■□□□ 1.22
NPDC1-206ENST00000496498 ZNF541Q9H0D2 1346 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 IQCA1LA6NCM1 817 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 BCAR3O75815 825 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 EPHA10Q5JZY3 1008 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 INTS3Q68E01 1043 aaKnown RBP22.68■■□□□ 1.22
NPDC1-206ENST00000496498 ANKRD2Q9GZV1 360 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 RRAGCQ9HB90 399 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 POLLQ9UGP5 575 aa22.68■■□□□ 1.22
NPDC1-206ENST00000496498 TOMM70O94826 608 aa22.67■■□□□ 1.22
NPDC1-206ENST00000496498 DDNO94850 711 aaPredicted RBP22.67■■□□□ 1.22
NPDC1-206ENST00000496498 UFL1O94874 794 aa22.67■■□□□ 1.22
NPDC1-206ENST00000496498 C1QTNF8P60827 252 aa22.67■■□□□ 1.22
NPDC1-206ENST00000496498 ZKSCAN2Q63HK3 967 aa22.67■■□□□ 1.22
NPDC1-206ENST00000496498 MINPP1Q9UNW1 487 aa22.67■■□□□ 1.22
NPDC1-206ENST00000496498 TRIM27P14373 513 aa22.66■■□□□ 1.22
NPDC1-206ENST00000496498 TAF7LQ5H9L4 462 aa22.66■■□□□ 1.22
NPDC1-206ENST00000496498 FRAT1Q92837 279 aaPredicted RBP22.66■■□□□ 1.22
NPDC1-206ENST00000496498 KAZALD1Q96I82 304 aa22.66■■□□□ 1.22
NPDC1-206ENST00000496498 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
NPDC1-206ENST00000496498 UBTFL1P0CB47 393 aaPredicted RBP22.65■■□□□ 1.22
NPDC1-206ENST00000496498 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
NPDC1-206ENST00000496498 LEMD3Q9Y2U8 911 aa22.65■■□□□ 1.22
NPDC1-206ENST00000496498 A0A1B0GUL6 1792 aa22.64■■□□□ 1.22
NPDC1-206ENST00000496498 RBM46Q8TBY0 533 aaKnown RBP22.64■■□□□ 1.21
NPDC1-206ENST00000496498 MED23Q9ULK4 1368 aa22.63■■□□□ 1.21
NPDC1-206ENST00000496498 TNIP1Q15025 636 aa22.63■■□□□ 1.21
NPDC1-206ENST00000496498 POTECB2RU33 542 aa22.62■■□□□ 1.21
NPDC1-206ENST00000496498 GNAI3P08754 354 aa22.62■■□□□ 1.21
NPDC1-206ENST00000496498 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
NPDC1-206ENST00000496498 G3V3G9 751 aa22.61■■□□□ 1.21
NPDC1-206ENST00000496498 CHRNDQ07001 517 aa22.61■■□□□ 1.21
NPDC1-206ENST00000496498 DCAF8Q5TAQ9 597 aa22.61■■□□□ 1.21
NPDC1-206ENST00000496498 CIAPIN1Q6FI81 312 aa22.61■■□□□ 1.21
NPDC1-206ENST00000496498 LDHAL6AQ6ZMR3 332 aa22.61■■□□□ 1.21
NPDC1-206ENST00000496498 RIMBP2O15034 1052 aa22.6■■□□□ 1.21
NPDC1-206ENST00000496498 CXCL9Q07325 125 aa22.6■■□□□ 1.21
NPDC1-206ENST00000496498 CNNM1Q9NRU3 951 aa22.6■■□□□ 1.21
NPDC1-206ENST00000496498 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
NPDC1-206ENST00000496498 GJA3Q9Y6H8 435 aa22.6■■□□□ 1.21
NPDC1-206ENST00000496498 ECE2O60344 883 aa22.59■■□□□ 1.21
NPDC1-206ENST00000496498 LMOD1P29536 600 aaPredicted RBP22.59■■□□□ 1.21
NPDC1-206ENST00000496498 FSTL1Q12841 308 aa22.59■■□□□ 1.21
NPDC1-206ENST00000496498 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
NPDC1-206ENST00000496498 PSME4Q14997 1843 aa22.59■■□□□ 1.21
NPDC1-206ENST00000496498 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 YDJCA8MPS7 323 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 MS4A1P11836 297 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 KCNJ4P48050 445 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 SMC1BQ8NDV3 1235 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 DBNDD1Q9H9R9 158 aa22.58■■□□□ 1.21
NPDC1-206ENST00000496498 PODNQ7Z5L7 613 aa22.57■■□□□ 1.2
NPDC1-206ENST00000496498 PNMA8AQ86V59 439 aaPredicted RBP22.57■■□□□ 1.2
NPDC1-206ENST00000496498 CLUAP1Q96AJ1 413 aa22.57■■□□□ 1.2
NPDC1-206ENST00000496498 ZNF594Q96JF6 807 aaPredicted RBP22.57■■□□□ 1.2
NPDC1-206ENST00000496498 MEIS3Q99687 375 aa22.57■■□□□ 1.2
NPDC1-206ENST00000496498 TAF1DQ9H5J8 278 aaPredicted RBP22.57■■□□□ 1.2
NPDC1-206ENST00000496498 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
NPDC1-206ENST00000496498 C15orf52Q6ZUT6 534 aaKnown RBP22.56■■□□□ 1.2
NPDC1-206ENST00000496498 DZIP1LQ8IYY4 767 aaKnown RBP22.56■■□□□ 1.2
NPDC1-206ENST00000496498 GPR101Q96P66 508 aaPredicted RBP22.56■■□□□ 1.2
NPDC1-206ENST00000496498 FBXO3Q9UK99 471 aa22.56■■□□□ 1.2
NPDC1-206ENST00000496498 RAD17O75943 681 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 EPHX2P34913 555 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 SCNN1DP51172 638 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 DOK7Q18PE1 504 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 COA1Q9GZY4 146 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 LRRFIP2Q9Y608 721 aaKnown RBP22.55■■□□□ 1.2
NPDC1-206ENST00000496498 ZNF609O15014 1411 aa22.55■■□□□ 1.2
NPDC1-206ENST00000496498 RPS12P25398 132 aaKnown RBP22.54■■□□□ 1.2
NPDC1-206ENST00000496498 TMEM57Q8N5G2 664 aa22.54■■□□□ 1.2
NPDC1-206ENST00000496498 GPRC5DQ9NZD1 345 aa22.54■■□□□ 1.2
NPDC1-206ENST00000496498 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 SCN9AQ15858 1988 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 LDHDQ86WU2 507 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 DPF2Q92785 391 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 TNNQ9UQP3 1299 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 RIPOR2Q9Y4F9 1068 aa22.53■■□□□ 1.2
NPDC1-206ENST00000496498 GNAI2P04899 355 aa22.52■■□□□ 1.2
NPDC1-206ENST00000496498 GMPSP49915 693 aaPredicted RBP22.52■■□□□ 1.2
NPDC1-206ENST00000496498 MTX1Q13505 466 aa22.52■■□□□ 1.2
NPDC1-206ENST00000496498 UBE4AQ14139 1066 aa22.52■■□□□ 1.2
NPDC1-206ENST00000496498 PSMD14O00487 310 aa22.51■■□□□ 1.19
NPDC1-206ENST00000496498 TAF5LO75529 589 aa22.51■■□□□ 1.19
NPDC1-206ENST00000496498 VIL1P09327 827 aaKnown RBP22.51■■□□□ 1.19
NPDC1-206ENST00000496498 RFX5P48382 616 aaPredicted RBP22.51■■□□□ 1.19
NPDC1-206ENST00000496498 USP50Q70EL3 339 aaPredicted RBP22.51■■□□□ 1.19
NPDC1-206ENST00000496498 ADARB2Q9NS39 739 aaKnown RBP22.51■■□□□ 1.19
NPDC1-206ENST00000496498 CHADLQ6NUI6 762 aa22.5■■□□□ 1.19
NPDC1-206ENST00000496498 HELBQ8NG08 1087 aaPredicted RBP22.5■■□□□ 1.19
NPDC1-206ENST00000496498 PUS3Q9BZE2 481 aaKnown RBP22.5■■□□□ 1.19
NPDC1-206ENST00000496498 USP17L3A6NCW0 530 aa22.49■■□□□ 1.19
NPDC1-206ENST00000496498 USP17L4A6NCW7 530 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms