RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TPCN2Q8NHX9 752 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 KLRG1Q96E93 195 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 LRRC4BQ9NT99 713 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 DNMT3AQ9Y6K1 912 aaPredicted RBP6.2□□□□□ -1.42
VPS52-222ENST00000495981 USP54Q70EL1 1684 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 SLIT3O75094 1523 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 TRPM1Q7Z4N2 1603 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 GOLGA8CPA6NN73 597 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 TLL1O43897 1013 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 RECKO95980 971 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 WEE1P30291 646 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 RGL3Q3MIN7 710 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 ZBTB33Q86T24 672 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 DZIP3Q86Y13 1208 aaKnown RBP6.19□□□□□ -1.42
VPS52-222ENST00000495981 GTF3C2Q8WUA4 911 aaPredicted RBP6.19□□□□□ -1.42
VPS52-222ENST00000495981 RNF166Q96A37 237 aaPredicted RBP6.19□□□□□ -1.42
VPS52-222ENST00000495981 PRAM1Q96QH2 718 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 CARD14Q9BXL6 1004 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 WWC3Q9ULE0 1092 aa6.19□□□□□ -1.42
VPS52-222ENST00000495981 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
VPS52-222ENST00000495981 AKAP12Q02952 1782 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 ESPNB1AK53 854 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 C21orf2O43822 256 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 EVA1CP58658 441 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 FKBP5Q13451 457 aaPredicted RBP6.18□□□□□ -1.42
VPS52-222ENST00000495981 GAS2L2Q8NHY3 880 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 FOXJ1Q92949 421 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 ASB16Q96NS5 453 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 C1QTNF2Q9BXJ5 285 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 WBP1LQ9NX94 342 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 COL18A1P39060 1754 aa6.18□□□□□ -1.42
VPS52-222ENST00000495981 POLR3AO14802 1390 aaPredicted RBP6.18□□□□□ -1.42
VPS52-222ENST00000495981 MON2Q7Z3U7 1717 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 MAGEB6P1A0A0J9YX57 407 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 GRIN3BO60391 1043 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 KCNQ4P56696 695 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 COPS2P61201 443 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
VPS52-222ENST00000495981 SBF2Q86WG5 1849 aa6.17□□□□□ -1.42
VPS52-222ENST00000495981 OVOS2A0A0G2JMS6 1433 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 OVOS2A0A0J9YW53 1432 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 OVOS2Q6IE36 1432 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 COL5A2P05997 1499 aaPredicted RBP6.16□□□□□ -1.42
VPS52-222ENST00000495981 GLYCTKQ8IVS8 523 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 BAP1Q92560 729 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 KCTD12Q96CX2 325 aaKnown RBP6.16□□□□□ -1.42
VPS52-222ENST00000495981 MKNK1Q9BUB5 465 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 HIRIP3Q9BW71 556 aaPredicted RBP6.16□□□□□ -1.42
VPS52-222ENST00000495981 DCTN4Q9UJW0 460 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 PNPLA7Q6ZV29 1317 aa6.16□□□□□ -1.42
VPS52-222ENST00000495981 NFAT5O94916 1531 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 ABCC6O95255 1503 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 PAPPAQ13219 1627 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 M0R2N6 131 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 ADH1BP00325 375 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 MAPK1P28482 360 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 FKBP4Q02790 459 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS52-222ENST00000495981 DDB1Q16531 1140 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 WNT2BQ93097 391 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 NMRK2Q9NPI5 230 aa6.15□□□□□ -1.42
VPS52-222ENST00000495981 THRAP3Q9Y2W1 955 aaKnown RBP6.15□□□□□ -1.42
VPS52-222ENST00000495981 USP19O94966 1318 aa6.15□□□□□ -1.43
VPS52-222ENST00000495981 HSPA1AP0DMV8 641 aaKnown RBP6.14□□□□□ -1.43
VPS52-222ENST00000495981 HSPA1BP0DMV9 641 aaKnown RBP6.14□□□□□ -1.43
VPS52-222ENST00000495981 NPR3P17342 541 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 LDLRAD1Q5T700 205 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 RGL4Q8IZJ4 473 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 ZNF511Q8NB15 262 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 ACSBG1Q96GR2 724 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 PCDHB11Q9Y5F2 797 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 CPDO75976 1380 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 GPRASP1Q5JY77 1395 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 NHSQ6T4R5 1651 aa6.14□□□□□ -1.43
VPS52-222ENST00000495981 TMEM229AB2RXF0 380 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 WASLO00401 505 aaPredicted RBP6.13□□□□□ -1.43
VPS52-222ENST00000495981 ZPR1O75312 459 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 TOMM70O94826 608 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 SCTRP47872 440 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 USP4Q13107 963 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 COL19A1Q14993 1142 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 LINC01559Q495D7 138 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 RNF20Q5VTR2 975 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 BPHLQ86WA6 291 aaPredicted RBP6.13□□□□□ -1.43
VPS52-222ENST00000495981 TRMT44Q8IYL2 757 aaKnown RBP6.13□□□□□ -1.43
VPS52-222ENST00000495981 CCDC24Q8N4L8 307 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS52-222ENST00000495981 COL26A1Q96A83 441 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 HINFPQ9BQA5 517 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 AATKQ6ZMQ8 1374 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 BCL9O00512 1426 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 TNS2Q63HR2 1409 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 RGPD5Q99666 1765 aa6.13□□□□□ -1.43
VPS52-222ENST00000495981 POLD1P28340 1107 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 USP6P35125 1406 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 MRPL58Q14197 206 aaKnown RBP6.12□□□□□ -1.43
VPS52-222ENST00000495981 PPIP5K1Q6PFW1 1433 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 NGDNQ8NEJ9 315 aaKnown RBP6.12□□□□□ -1.43
VPS52-222ENST00000495981 HELQQ8TDG4 1101 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms