RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
GAPVD1-218ENST00000495588 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 TYRO3Q06418 890 aa8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 C1orf53Q5VUE5 145 aa8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 PTPN23Q9H3S7 1636 aa8.32□□□□□ -1.08
GAPVD1-218ENST00000495588 GLI2P10070 1586 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 PLCH2O75038 1416 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 MIA2Q96PC5 1412 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 TXKP42681 527 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 SH3PXD2AQ5TCZ1 1133 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 DMRTC2Q8IXT2 367 aaPredicted RBP8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 PCMTD2Q9NV79 361 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 MAP3K4Q9Y6R4 1608 aa8.31□□□□□ -1.08
GAPVD1-218ENST00000495588 ARHGAP5Q13017 1502 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 SKIP12755 728 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 EFCC1Q9HA90 598 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 CFDP1Q9UEE9 299 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 MAFBQ9Y5Q3 323 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 KIF13AQ9H1H9 1805 aa8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-218ENST00000495588 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 ATP9BO43861 1147 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 RGS9O75916 674 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 FAM69CQ0P6D2 419 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 FAM50AQ14320 339 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 DTWD1Q8N5C7 304 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 WFDC12Q8WWY7 111 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 SUSD3Q96L08 255 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 CAMSAP2Q08AD1 1489 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 ARAP3Q8WWN8 1544 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 CD109Q6YHK3 1445 aa8.29□□□□□ -1.08
GAPVD1-218ENST00000495588 COBLO75128 1261 aa8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 IREB2P48200 963 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 HIRAP54198 1017 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 NCOA4Q13772 614 aa8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 DNAJB12Q9NXW2 375 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 HCN4Q9Y3Q4 1203 aa8.28□□□□□ -1.08
GAPVD1-218ENST00000495588 FANCAO15360 1455 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 RETREG2Q8NC44 543 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 ZNF280CQ8ND82 737 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 PNMA5Q96PV4 448 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 PCGF6Q9BYE7 350 aa8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-218ENST00000495588 TSPOAP1O95153 1857 aa8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 SYCP2Q9BX26 1530 aa8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 ACIN1Q9UKV3 1341 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-218ENST00000495588 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 ABCC1P33527 1531 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 ARHGEF12Q9NZN5 1544 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 ATG7O95352 703 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 YBX3P16989 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 NOS3P29474 1203 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 ITGAEP38570 1179 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 HIF1AQ16665 826 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 EFCAB2Q5VUJ9 269 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 PRR23CQ6ZRP0 262 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 SLC51AQ86UW1 340 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 FBXO11Q86XK2 927 aa8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 TSPAN10Q9H1Z9 355 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-218ENST00000495588 CFAP74Q9C0B2 1584 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 DAPK1P53355 1430 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 PTPRKQ15262 1439 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 HNRNPMP52272 730 aaKnown RBP eCLIP8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 PCSK7Q16549 785 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 TRIM50Q86XT4 487 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 USTQ9Y2C2 406 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
GAPVD1-218ENST00000495588 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 ABCC5O15440 1437 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 AKNAQ7Z591 1439 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 RFX1P22670 979 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 PDE4CQ08493 712 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 POTEAQ6S8J7 498 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 FAM35AQ86V20 835 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 TPCN2Q8NHX9 752 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 MEGF10Q96KG7 1140 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms