RNA–Protein interactions for RNA: ENST00000494855.5

UPK1B-204, Transcript of uroplakin 1B, humanhuman

TSL 5

Gene UPK1B, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-204ENST00000494855 GRAPLQ8TC17 118 aaPredicted RBP10.56□□□□□ -0.72
UPK1B-204ENST00000494855 TRIM17Q9Y577 477 aa10.56□□□□□ -0.72
UPK1B-204ENST00000494855 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
UPK1B-204ENST00000494855 U2SURPO15042 1029 aaKnown RBP10.55□□□□□ -0.72
UPK1B-204ENST00000494855 ECE2O60344 883 aa10.55□□□□□ -0.72
UPK1B-204ENST00000494855 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
UPK1B-204ENST00000494855 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
UPK1B-204ENST00000494855 GIGYF2Q6Y7W6 1299 aaKnown RBP10.55□□□□□ -0.72
UPK1B-204ENST00000494855 PPP1R42Q7Z4L9 355 aa10.55□□□□□ -0.72
UPK1B-204ENST00000494855 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
UPK1B-204ENST00000494855 CDH23Q9H251 3354 aa10.54□□□□□ -0.72
UPK1B-204ENST00000494855 VIL1P09327 827 aaKnown RBP10.54□□□□□ -0.72
UPK1B-204ENST00000494855 HCLS1P14317 486 aaPredicted RBP10.54□□□□□ -0.72
UPK1B-204ENST00000494855 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
UPK1B-204ENST00000494855 CAP1Q01518 475 aa10.54□□□□□ -0.72
UPK1B-204ENST00000494855 SREBF2Q12772 1141 aa10.54□□□□□ -0.72
UPK1B-204ENST00000494855 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
UPK1B-204ENST00000494855 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
UPK1B-204ENST00000494855 SCARF1Q14162 830 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 CHRDL2Q6WN34 429 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 LRP10Q7Z4F1 713 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 ZNF333Q96JL9 665 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
UPK1B-204ENST00000494855 POLLQ9UGP5 575 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
UPK1B-204ENST00000494855 PTPN22Q9Y2R2 807 aa10.53□□□□□ -0.72
UPK1B-204ENST00000494855 RRP7AQ9Y3A4 280 aaKnown RBP10.53□□□□□ -0.72
UPK1B-204ENST00000494855 OTOFQ9HC10 1997 aa10.52□□□□□ -0.72
UPK1B-204ENST00000494855 ZSWIM8A7E2V4 1837 aa10.52□□□□□ -0.73
UPK1B-204ENST00000494855 HSPA5P11021 654 aaKnown RBP10.52□□□□□ -0.73
UPK1B-204ENST00000494855 MYL6BP14649 208 aa10.52□□□□□ -0.73
UPK1B-204ENST00000494855 DOK7Q18PE1 504 aa10.52□□□□□ -0.73
UPK1B-204ENST00000494855 DDX46Q7L014 1031 aaKnown RBP10.52□□□□□ -0.73
UPK1B-204ENST00000494855 GMLQ99445 158 aa10.52□□□□□ -0.73
UPK1B-204ENST00000494855 PRO3102Q9H379 93 aa10.52□□□□□ -0.73
UPK1B-204ENST00000494855 RIMBP2O15034 1052 aa10.51□□□□□ -0.73
UPK1B-204ENST00000494855 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
UPK1B-204ENST00000494855 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
UPK1B-204ENST00000494855 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
UPK1B-204ENST00000494855 GPSM2P81274 684 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 PTPN12Q05209 780 aaKnown RBP10.5□□□□□ -0.73
UPK1B-204ENST00000494855 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 CD99L2Q8TCZ2 262 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 RTF1Q92541 710 aaKnown RBP10.5□□□□□ -0.73
UPK1B-204ENST00000494855 MYOZ2Q9NPC6 264 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 MIS18AQ9NYP9 233 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
UPK1B-204ENST00000494855 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 NLRP10Q86W26 655 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 AGBL3Q8NEM8 1001 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 ERO1AQ96HE7 468 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 NSFL1CQ9UNZ2 370 aaKnown RBP10.49□□□□□ -0.73
UPK1B-204ENST00000494855 NCOR1O75376 2440 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 ECM29Q5VYK3 1845 aa10.49□□□□□ -0.73
UPK1B-204ENST00000494855 PER1O15534 1290 aaPredicted RBP10.48□□□□□ -0.73
UPK1B-204ENST00000494855 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
UPK1B-204ENST00000494855 TTLL12Q14166 644 aaPredicted RBP10.48□□□□□ -0.73
UPK1B-204ENST00000494855 PROSER3Q2NL68 480 aa10.48□□□□□ -0.73
UPK1B-204ENST00000494855 CC2D1BQ5T0F9 858 aaKnown RBP10.48□□□□□ -0.73
UPK1B-204ENST00000494855 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
UPK1B-204ENST00000494855 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
UPK1B-204ENST00000494855 SH3TC1Q8TE82 1336 aa10.48□□□□□ -0.73
UPK1B-204ENST00000494855 SOX1O00570 391 aaPredicted RBP10.47□□□□□ -0.73
UPK1B-204ENST00000494855 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
UPK1B-204ENST00000494855 EIF4G2P78344 907 aaKnown RBP eCLIP10.47□□□□□ -0.73
UPK1B-204ENST00000494855 CRHR2Q13324 411 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 PDIA6Q15084 440 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 NBPF9Q3BBW0 867 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 EYA3Q99504 573 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
UPK1B-204ENST00000494855 EFCC1Q9HA90 598 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
UPK1B-204ENST00000494855 BDP1A6H8Y1 2624 aa10.47□□□□□ -0.73
UPK1B-204ENST00000494855 DNAH12Q6ZR08 3092 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 MANSC4A6NHS7 340 aaPredicted RBP10.46□□□□□ -0.73
UPK1B-204ENST00000494855 USP17L8P0C7I0 530 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 TCIRG1Q13488 830 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 SHISA4Q96DD7 197 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 TMEM106CQ9BVX2 250 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 PODXL2Q9NZ53 605 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 TRMT112Q9UI30 125 aaKnown RBP10.46□□□□□ -0.73
UPK1B-204ENST00000494855 PTCH2Q9Y6C5 1203 aa10.46□□□□□ -0.73
UPK1B-204ENST00000494855 COL1A1P02452 1464 aaPredicted RBP10.46□□□□□ -0.74
UPK1B-204ENST00000494855 ALPK3Q96L96 1907 aa10.46□□□□□ -0.74
UPK1B-204ENST00000494855 SPEF2Q9C093 1822 aa10.45□□□□□ -0.74
UPK1B-204ENST00000494855 UFL1O94874 794 aa10.45□□□□□ -0.74
UPK1B-204ENST00000494855 ANXA1P04083 346 aa10.45□□□□□ -0.74
UPK1B-204ENST00000494855 ZBTB48P10074 688 aaPredicted RBP10.45□□□□□ -0.74
UPK1B-204ENST00000494855 SLC9C1Q4G0N8 1177 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms