RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 HCLS1P14317 486 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-212ENST00000494815 GNPATO15228 680 aa22.31■■□□□ 1.16
TSPAN4-212ENST00000494815 FAM196AQ6ZSG2 479 aa22.31■■□□□ 1.16
TSPAN4-212ENST00000494815 CNNM1Q9NRU3 951 aa22.31■■□□□ 1.16
TSPAN4-212ENST00000494815 RTCBQ9Y3I0 505 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-212ENST00000494815 FAM177BA6PVY3 158 aa22.3■■□□□ 1.16
TSPAN4-212ENST00000494815 METTL24Q5JXM2 366 aa22.3■■□□□ 1.16
TSPAN4-212ENST00000494815 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
TSPAN4-212ENST00000494815 NMIQ13287 307 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 CCDC152Q4G0S7 254 aa22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 PALD1Q9ULE6 856 aa22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 DDX60Q8IY21 1712 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 GRPEL1Q9HAV7 217 aa22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 ABCC12Q96J65 1359 aa22.29■■□□□ 1.16
TSPAN4-212ENST00000494815 CCDC158Q5M9N0 1113 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 FAM227BQ96M60 508 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 VGLL2Q8N8G2 317 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 KBTBD3Q8NAB2 608 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 EDC3Q96F86 508 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 XAGE2Q96GT9 111 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
TSPAN4-212ENST00000494815 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
TSPAN4-212ENST00000494815 MROH5Q6ZUA9 1318 aa22.27■■□□□ 1.16
TSPAN4-212ENST00000494815 ATP2B3Q16720 1220 aa22.27■■□□□ 1.16
TSPAN4-212ENST00000494815 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
TSPAN4-212ENST00000494815 C4BP0C0L5 1744 aa22.27■■□□□ 1.16
TSPAN4-212ENST00000494815 MED23Q9ULK4 1368 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 CCDC171Q6TFL3 1326 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 ZPR1O75312 459 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 IFIT1P09914 478 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 GORABQ5T7V8 394 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 A0A0D9SFI3 127 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 USPL1Q5W0Q7 1092 aa22.26■■□□□ 1.15
TSPAN4-212ENST00000494815 PDE8BO95263 885 aa22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 ZNF772Q68DY9 489 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 MCM2P49736 904 aa22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 DDX46Q7L014 1031 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 TNPO1Q92973 898 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-212ENST00000494815 ADORA1P30542 326 aa22.24■■□□□ 1.15
TSPAN4-212ENST00000494815 NEK4P51957 841 aa22.24■■□□□ 1.15
TSPAN4-212ENST00000494815 TTC39AQ5SRH9 613 aa22.24■■□□□ 1.15
TSPAN4-212ENST00000494815 NYXQ9GZU5 481 aa22.24■■□□□ 1.15
TSPAN4-212ENST00000494815 NDUFB9Q9Y6M9 179 aa22.24■■□□□ 1.15
TSPAN4-212ENST00000494815 HSP90AA1P07900 732 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 PTH1RQ03431 593 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 MPHOSPH8Q99549 860 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 BRWD3Q6RI45 1802 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 GOLIM4O00461 696 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 RBM6P78332 1123 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 SLC27A3Q5K4L6 730 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 MAP4K1Q92918 833 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 ZNF512BQ96KM6 892 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 SNX14Q9Y5W7 946 aa22.23■■□□□ 1.15
TSPAN4-212ENST00000494815 ADRA2BP18089 450 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 PTMSP20962 102 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 SF3B3Q15393 1217 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 PUM3Q15397 648 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 ERFEQ4G0M1 354 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 KCNB2Q92953 911 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 SMIM5Q71RC9 77 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 NAP1L5Q96NT1 182 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 SEC31BQ9NQW1 1179 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 LRRC4BQ9NT99 713 aa22.22■■□□□ 1.15
TSPAN4-212ENST00000494815 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 CDC5LQ99459 802 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 NECTIN1Q15223 517 aa22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 SKOR2Q2VWA4 1001 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 BICDL1Q6ZP65 573 aa22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 AMIGO3Q86WK7 504 aa22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 LPIN2Q92539 896 aa22.21■■□□□ 1.15
TSPAN4-212ENST00000494815 FGFR2P21802 821 aa22.2■■□□□ 1.14
TSPAN4-212ENST00000494815 RFC4P35249 363 aa22.2■■□□□ 1.14
TSPAN4-212ENST00000494815 LRRFIP1Q32MZ4 808 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-212ENST00000494815 GTF2E1P29083 439 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 MCMDC2Q4G0Z9 681 aa22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 RBM8AQ9Y5S9 174 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 C4AP0C0L4 1744 aa22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 ZNF589Q86UQ0 364 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 RASEFQ8IZ41 740 aa22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 HELLSQ9NRZ9 838 aa22.19■■□□□ 1.14
TSPAN4-212ENST00000494815 TAF5LO75529 589 aa22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 TRIM37O94972 964 aa22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 PRPF40BQ6NWY9 871 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 TPTE2Q6XPS3 522 aa22.18■■□□□ 1.14
TSPAN4-212ENST00000494815 KCNJ4P48050 445 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms