RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 RSPO4Q2I0M5 234 aaPredicted RBP8.82□□□□□ -1
CCDC66-222ENST00000494672 OR13H1Q8NG92 308 aa8.82□□□□□ -1
CCDC66-222ENST00000494672 RPLP1P05386 114 aaKnown RBP8.81□□□□□ -1
CCDC66-222ENST00000494672 GDF6Q6KF10 455 aaPredicted RBP8.81□□□□□ -1
CCDC66-222ENST00000494672 C14orf37Q86TY3 774 aa8.81□□□□□ -1
CCDC66-222ENST00000494672 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
CCDC66-222ENST00000494672 SPACA7Q96KW9 195 aa8.81□□□□□ -1
CCDC66-222ENST00000494672 HYAL2Q12891 473 aa8.8□□□□□ -1
CCDC66-222ENST00000494672 NKAPLQ5M9Q1 402 aa8.8□□□□□ -1
CCDC66-222ENST00000494672 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
CCDC66-222ENST00000494672 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
CCDC66-222ENST00000494672 IL22RA1Q8N6P7 574 aa8.79□□□□□ -1
CCDC66-222ENST00000494672 PCSK2P16519 638 aa8.78□□□□□ -1
CCDC66-222ENST00000494672 SCNN1AP37088 669 aa8.78□□□□□ -1
CCDC66-222ENST00000494672 PDE12Q6L8Q7 609 aaKnown RBP8.78□□□□□ -1
CCDC66-222ENST00000494672 HELQQ8TDG4 1101 aa8.78□□□□□ -1
CCDC66-222ENST00000494672 MUC3BQ9H195 1237 aa8.78□□□□□ -1
CCDC66-222ENST00000494672 ABI2Q9NYB9 513 aaPredicted RBP8.78□□□□□ -1
CCDC66-222ENST00000494672 DYRK3O43781 588 aa8.77□□□□□ -1.01
CCDC66-222ENST00000494672 TTC16Q8NEE8 873 aa8.77□□□□□ -1.01
CCDC66-222ENST00000494672 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
CCDC66-222ENST00000494672 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
CCDC66-222ENST00000494672 ELP3Q9H9T3 547 aa8.77□□□□□ -1.01
CCDC66-222ENST00000494672 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
CCDC66-222ENST00000494672 TMEM88BA6NKF7 163 aa8.76□□□□□ -1.01
CCDC66-222ENST00000494672 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
CCDC66-222ENST00000494672 SMNDC1O75940 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC66-222ENST00000494672 SSFA2P28290 1259 aa8.76□□□□□ -1.01
CCDC66-222ENST00000494672 NOM1Q5C9Z4 860 aaKnown RBP8.76□□□□□ -1.01
CCDC66-222ENST00000494672 MAP4K3Q8IVH8 894 aa8.76□□□□□ -1.01
CCDC66-222ENST00000494672 GTF3C2Q8WUA4 911 aaPredicted RBP8.76□□□□□ -1.01
CCDC66-222ENST00000494672 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
CCDC66-222ENST00000494672 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
CCDC66-222ENST00000494672 DLL1O00548 723 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 H2AFB1P0C5Y9 115 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 H2AFB2P0C5Z0 115 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 ALKBH2Q6NS38 261 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 ZNF438Q7Z4V0 828 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 EDEM1Q92611 657 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 TRIM33Q9UPN9 1127 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 MTMR7Q9Y216 660 aa8.75□□□□□ -1.01
CCDC66-222ENST00000494672 ITGB7P26010 798 aa8.74□□□□□ -1.01
CCDC66-222ENST00000494672 IREB2P48200 963 aaKnown RBP8.74□□□□□ -1.01
CCDC66-222ENST00000494672 DNM1Q05193 864 aaKnown RBP8.74□□□□□ -1.01
CCDC66-222ENST00000494672 COL13A1Q5TAT6 717 aaPredicted RBP8.74□□□□□ -1.01
CCDC66-222ENST00000494672 CEP135Q66GS9 1140 aa8.74□□□□□ -1.01
CCDC66-222ENST00000494672 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
CCDC66-222ENST00000494672 KIF4AO95239 1232 aa8.73□□□□□ -1.01
CCDC66-222ENST00000494672 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
CCDC66-222ENST00000494672 NCAPG2Q86XI2 1143 aa8.73□□□□□ -1.01
CCDC66-222ENST00000494672 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
CCDC66-222ENST00000494672 CYP2E1P05181 493 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-222ENST00000494672 MZF1P28698 734 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-222ENST00000494672 AAMPQ13685 434 aa8.72□□□□□ -1.01
CCDC66-222ENST00000494672 SETDB1Q15047 1291 aa8.72□□□□□ -1.01
CCDC66-222ENST00000494672 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
CCDC66-222ENST00000494672 ZMYM1Q5SVZ6 1142 aa8.72□□□□□ -1.01
CCDC66-222ENST00000494672 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-222ENST00000494672 FAM177BA6PVY3 158 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 MPSTP25325 297 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 NOS3P29474 1203 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 CDC27P30260 824 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
CCDC66-222ENST00000494672 ATP11AP98196 1134 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 Q8N3U1 123 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 CEP120Q8N960 986 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 LACRTQ9GZZ8 138 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
CCDC66-222ENST00000494672 FAM13AO94988 1023 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 PDGFAP04085 211 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 PRSS36Q5K4E3 855 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 PBX4Q9BYU1 374 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 CNTN3Q9P232 1028 aa8.7□□□□□ -1.02
CCDC66-222ENST00000494672 LINC01387J3KSC0 135 aa8.69□□□□□ -1.02
CCDC66-222ENST00000494672 CES1P23141 567 aa8.69□□□□□ -1.02
CCDC66-222ENST00000494672 XP32Q5T750 250 aa8.69□□□□□ -1.02
CCDC66-222ENST00000494672 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
CCDC66-222ENST00000494672 NPR3P17342 541 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 PTPRAP18433 802 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC66-222ENST00000494672 SF3B2Q13435 895 aaKnown RBP8.68□□□□□ -1.02
CCDC66-222ENST00000494672 MTMR3Q13615 1198 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 C1orf127Q8N9H9 656 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 KANSL3Q9P2N6 904 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 SALL4Q9UJQ4 1053 aa8.68□□□□□ -1.02
CCDC66-222ENST00000494672 USP5P45974 858 aa8.67□□□□□ -1.02
CCDC66-222ENST00000494672 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
CCDC66-222ENST00000494672 POLIQ9UNA4 740 aa8.67□□□□□ -1.02
CCDC66-222ENST00000494672 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
CCDC66-222ENST00000494672 ALX3O95076 343 aa8.66□□□□□ -1.02
CCDC66-222ENST00000494672 EHHADHQ08426 723 aa8.66□□□□□ -1.02
CCDC66-222ENST00000494672 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
CCDC66-222ENST00000494672 MEGF10Q96KG7 1140 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms