RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
SCRN1-209ENST00000494620 GRM8O00222 908 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 ECE2O60344 883 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 CSF1RP07333 972 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 ITGA6P23229 1130 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 KCNJ4P48050 445 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
SCRN1-209ENST00000494620 SCNN1DP51172 638 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 DPF2Q92785 391 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
SCRN1-209ENST00000494620 PTPRCP08575 1304 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
SCRN1-209ENST00000494620 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 PODNQ7Z5L7 613 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
SCRN1-209ENST00000494620 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
SCRN1-209ENST00000494620 MINPP1Q9UNW1 487 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
SCRN1-209ENST00000494620 TMEM88BA6NKF7 163 aa13.9□□□□□ -0.18
SCRN1-209ENST00000494620 HTRA3P83110 453 aa13.9□□□□□ -0.18
SCRN1-209ENST00000494620 MAP1SQ66K74 1059 aaPredicted RBP13.9□□□□□ -0.18
SCRN1-209ENST00000494620 PSMD14O00487 310 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
SCRN1-209ENST00000494620 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
SCRN1-209ENST00000494620 CASP7P55210 303 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
SCRN1-209ENST00000494620 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
SCRN1-209ENST00000494620 YDJCA8MPS7 323 aa13.88□□□□□ -0.19
SCRN1-209ENST00000494620 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
SCRN1-209ENST00000494620 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
SCRN1-209ENST00000494620 SCN4AP35499 1836 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
SCRN1-209ENST00000494620 FOXO4P98177 505 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
SCRN1-209ENST00000494620 AGBL3Q8NEM8 1001 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 GPR101Q96P66 508 aaPredicted RBP13.87□□□□□ -0.19
SCRN1-209ENST00000494620 COA1Q9GZY4 146 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
SCRN1-209ENST00000494620 ZNF804BA4D1E1 1349 aa13.87□□□□□ -0.19
SCRN1-209ENST00000494620 CACNA1FO60840 1977 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 RBM26Q5T8P6 1007 aaKnown RBP13.86□□□□□ -0.19
SCRN1-209ENST00000494620 CDC37L1Q7L3B6 337 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 MIER1Q8N108 512 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 API5Q9BZZ5 524 aaKnown RBP13.86□□□□□ -0.19
SCRN1-209ENST00000494620 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
SCRN1-209ENST00000494620 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
SCRN1-209ENST00000494620 CHRNDQ07001 517 aa13.85□□□□□ -0.19
SCRN1-209ENST00000494620 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
SCRN1-209ENST00000494620 OGFOD1Q8N543 542 aa13.85□□□□□ -0.19
SCRN1-209ENST00000494620 FBXW7Q969H0 707 aa13.85□□□□□ -0.19
SCRN1-209ENST00000494620 DCPSQ96C86 337 aaKnown RBP13.85□□□□□ -0.19
SCRN1-209ENST00000494620 ABT1Q9ULW3 272 aaKnown RBP13.85□□□□□ -0.19
SCRN1-209ENST00000494620 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
SCRN1-209ENST00000494620 MMP14P50281 582 aa13.84□□□□□ -0.19
SCRN1-209ENST00000494620 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
SCRN1-209ENST00000494620 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
SCRN1-209ENST00000494620 KCNQ5Q9NR82 932 aa13.84□□□□□ -0.19
SCRN1-209ENST00000494620 MKRN1Q9UHC7 482 aaKnown RBP13.84□□□□□ -0.19
SCRN1-209ENST00000494620 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
SCRN1-209ENST00000494620 MED23Q9ULK4 1368 aa13.83□□□□□ -0.19
SCRN1-209ENST00000494620 LAMB2P55268 1798 aa13.83□□□□□ -0.19
SCRN1-209ENST00000494620 COL4A5P29400 1685 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 PLIN1O60240 522 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 NBPF7P0C2Y1 421 aaPredicted RBP13.83□□□□□ -0.2
SCRN1-209ENST00000494620 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 NOB1Q9ULX3 412 aaKnown RBP13.83□□□□□ -0.2
SCRN1-209ENST00000494620 MYO3BQ8WXR4 1341 aa13.83□□□□□ -0.2
SCRN1-209ENST00000494620 BRPF1P55201 1214 aaPredicted RBP13.82□□□□□ -0.2
SCRN1-209ENST00000494620 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCRN1-209ENST00000494620 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
SCRN1-209ENST00000494620 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
SCRN1-209ENST00000494620 TTLL5Q6EMB2 1281 aa13.82□□□□□ -0.2
SCRN1-209ENST00000494620 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
SCRN1-209ENST00000494620 ZNF804AQ7Z570 1209 aa13.82□□□□□ -0.2
SCRN1-209ENST00000494620 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
SCRN1-209ENST00000494620 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
SCRN1-209ENST00000494620 UTYO14607 1347 aa13.82□□□□□ -0.2
SCRN1-209ENST00000494620 TAF1P21675 1872 aa13.81□□□□□ -0.2
SCRN1-209ENST00000494620 TAF5LO75529 589 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms