RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 SH2B1Q9NRF2 756 aaPredicted RBP18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 CCDC87Q9NVE4 849 aa18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 TRMT112Q9UI30 125 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
PDZRN3-211ENST00000494559 MYH14Q7Z406 1995 aaKnown RBP18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 LOC102724428A0A0B4J2F2 783 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 ITGA6P23229 1130 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 SIK1P57059 783 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 TAF7LQ5H9L4 462 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 XAGE2Q96GT9 111 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.55■□□□□ 0.56
PDZRN3-211ENST00000494559 ADORA1P30542 326 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ZMYM1Q5SVZ6 1142 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ISY1Q9ULR0 285 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ITPK1Q13572 414 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 WDR33Q9C0J8 1336 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-211ENST00000494559 ANKRD18BA2A2Z9 1011 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 PDE8AO60658 829 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 XRCC6P12956 609 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 ME3Q16798 604 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 CCDC158Q5M9N0 1113 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 TPCN1Q9ULQ1 816 aa18.53■□□□□ 0.56
PDZRN3-211ENST00000494559 KRT32Q14532 448 aa18.52■□□□□ 0.56
PDZRN3-211ENST00000494559 LDHAL6AQ6ZMR3 332 aa18.52■□□□□ 0.56
PDZRN3-211ENST00000494559 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
PDZRN3-211ENST00000494559 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
PDZRN3-211ENST00000494559 A0A0G2JS52 829 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 RNF113AO15541 343 aaKnown RBP18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 TTC39AQ5SRH9 613 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 LRP5O75197 1615 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 CYP21A2P08686 494 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 AK7Q96M32 723 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 DSCC1Q9BVC3 393 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 ABCC12Q96J65 1359 aa18.51■□□□□ 0.55
PDZRN3-211ENST00000494559 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 SYT1P21579 422 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 MRE11P49959 708 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 ATP2B3Q16720 1220 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 GORABQ5T7V8 394 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 GPT2Q8TD30 523 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 AKAP11Q9UKA4 1901 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 KCNQ2O43526 872 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 SCARF1Q14162 830 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
PDZRN3-211ENST00000494559 STX6O43752 255 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 MAST3O60307 1309 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 LAMA4Q16363 1823 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 NEK1Q96PY6 1258 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 TCHHQ07283 1943 aa18.49■□□□□ 0.55
PDZRN3-211ENST00000494559 ZSCAN22P10073 491 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 GJB2P29033 226 aa18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 NECAB1Q8N987 351 aa18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 GRPEL1Q9HAV7 217 aa18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 CNNM1Q9NRU3 951 aa18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 MYH7P12883 1935 aa18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-211ENST00000494559 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-211ENST00000494559 VPS72Q15906 364 aa18.47■□□□□ 0.55
PDZRN3-211ENST00000494559 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-211ENST00000494559 ZNF512BQ96KM6 892 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-211ENST00000494559 M0R2C6 588 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 PDE8BO95263 885 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 ZAP70P43403 619 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 CAVIN1Q6NZI2 390 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 BCORQ6W2J9 1755 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 LRRFIP1Q32MZ4 808 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 PARP10Q53GL7 1025 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 LAMB2P55268 1798 aa18.46■□□□□ 0.55
PDZRN3-211ENST00000494559 ARAP2Q8WZ64 1704 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 ZFYP08048 801 aaPredicted RBP18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 MCAMP43121 646 aa18.45■□□□□ 0.54
PDZRN3-211ENST00000494559 ZNF445P59923 1031 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms