RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 CC2D2BQ6DHV5 1058 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
SRPRB-205ENST00000494297 SLC4A10Q6U841 1118 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 ANKRD36CQ5JPF3 1778 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 N4BP2Q86UW6 1770 aaPredicted RBP6.81□□□□□ -1.32
SRPRB-205ENST00000494297 ANKRD31Q8N7Z5 1873 aa6.81□□□□□ -1.32
SRPRB-205ENST00000494297 C21orf2O43822 256 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 CTSWP56202 376 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 FOXO4P98177 505 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 GRAPQ13588 217 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 CCDC152Q4G0S7 254 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 INTS3Q68E01 1043 aaKnown RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 ATF7IPQ6VMQ6 1270 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 RTKN2Q8IZC4 609 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 GRAPLQ8TC17 118 aaPredicted RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 USP44Q9H0E7 712 aa6.8□□□□□ -1.32
SRPRB-205ENST00000494297 C9orf78Q9NZ63 289 aaPredicted RBP6.8□□□□□ -1.32
SRPRB-205ENST00000494297 ABCC4O15439 1325 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 LTBP3Q9NS15 1303 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 BRCA1P38398 1863 aaKnown RBP6.79□□□□□ -1.32
SRPRB-205ENST00000494297 NBPF7P0C2Y1 421 aaPredicted RBP6.79□□□□□ -1.32
SRPRB-205ENST00000494297 TRIM27P14373 513 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 EMP3P54852 163 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 RPS8P62241 208 aaKnown RBP6.79□□□□□ -1.32
SRPRB-205ENST00000494297 CCDC93Q567U6 631 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 ZKSCAN2Q63HK3 967 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 UBE3BQ7Z3V4 1068 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 ATP6V0A2Q9Y487 856 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 DLEC1Q9Y238 1755 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 RTL9Q8NET4 1388 aa6.79□□□□□ -1.32
SRPRB-205ENST00000494297 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 SNED1Q8TER0 1413 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 NFKBIEO00221 500 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 PPEF1O14829 653 aaPredicted RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 FKBP4Q02790 459 aaKnown RBP eCLIP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 EFCAB3Q8N7B9 438 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 FRAT1Q92837 279 aaPredicted RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 CELF1Q92879 486 aaKnown RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 KAZALD1Q96I82 304 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 PSMD1Q99460 953 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 RTFDC1Q9BY42 306 aaPredicted RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 VPS33BQ9H267 617 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 SEC31BQ9NQW1 1179 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 RCAN3Q9UKA8 241 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
SRPRB-205ENST00000494297 COL11A2P13942 1736 aaPredicted RBP6.78□□□□□ -1.32
SRPRB-205ENST00000494297 DDX60Q8IY21 1712 aaKnown RBP6.77□□□□□ -1.33
SRPRB-205ENST00000494297 LMNB1P20700 586 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 ITGA6P23229 1130 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 PRELPP51888 382 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 RABL6Q3YEC7 729 aaPredicted RBP6.77□□□□□ -1.33
SRPRB-205ENST00000494297 EPHA10Q5JZY3 1008 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 LMBR1LQ6UX01 489 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 OLFM4Q6UX06 510 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 ANKRD18AQ8IVF6 992 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
SRPRB-205ENST00000494297 SUCLG2Q96I99 432 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 CDC5LQ99459 802 aaKnown RBP6.77□□□□□ -1.33
SRPRB-205ENST00000494297 TAOK3Q9H2K8 898 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 GREM2Q9H772 168 aa6.77□□□□□ -1.33
SRPRB-205ENST00000494297 BSDC1Q9NW68 430 aaPredicted RBP6.77□□□□□ -1.33
SRPRB-205ENST00000494297 SLX4Q8IY92 1834 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 ARFGEF1Q9Y6D6 1849 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 ANKRD18BA2A2Z9 1011 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 ZBTB7BO15156 539 aaPredicted RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 GNAI3P08754 354 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 MS4A1P11836 297 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 YY1P25490 414 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 RASSF7Q02833 373 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 IFIT5Q13325 482 aaKnown RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 CCDC57Q2TAC2 916 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 C9orf131Q5VYM1 1079 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 MPNDQ8N594 471 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 SUPT20HQ8NEM7 779 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 YTHDC1Q96MU7 727 aaKnown RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 CCDC85AQ96PX6 553 aaPredicted RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 BICC1Q9H694 974 aaKnown RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 PODXL2Q9NZ53 605 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 TNNQ9UQP3 1299 aa6.76□□□□□ -1.33
SRPRB-205ENST00000494297 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
SRPRB-205ENST00000494297 POTEB3A0JP26 581 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 FAM205CA6NFA0 338 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 UBTFL1P0CB47 393 aaPredicted RBP6.75□□□□□ -1.33
SRPRB-205ENST00000494297 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
SRPRB-205ENST00000494297 GPSM2P81274 684 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 FAM161AQ3B820 660 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 POTEBQ6S5H4 581 aa6.75□□□□□ -1.33
SRPRB-205ENST00000494297 DPP8Q6V1X1 898 aaPredicted RBP6.75□□□□□ -1.33
SRPRB-205ENST00000494297 ZNF710Q8N1W2 664 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms