RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 SSFA2P28290 1259 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 SUSD4Q5VX71 490 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 ZNF772Q68DY9 489 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-208ENST00000494028 PTF1AQ7RTS3 328 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
CLCN6-208ENST00000494028 AK7Q96M32 723 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 TAF1P21675 1872 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
CLCN6-208ENST00000494028 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 DDX11L8A8MPP1 907 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
CLCN6-208ENST00000494028 CHGBP05060 677 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 NECTIN1Q15223 517 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 ATP2B3Q16720 1220 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 CREB3L3Q68CJ9 461 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 PRPF40BQ6NWY9 871 aaKnown RBP12.83□□□□□ -0.36
CLCN6-208ENST00000494028 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
CLCN6-208ENST00000494028 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 CHD4Q14839 1912 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 GOLIM4O00461 696 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 SLC27A2O14975 620 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
CLCN6-208ENST00000494028 TIMM10P62072 90 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 METTL24Q5JXM2 366 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
CLCN6-208ENST00000494028 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
CLCN6-208ENST00000494028 RGL2O15211 777 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 AK2P54819 239 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 CLEC17AQ6ZS10 378 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
CLCN6-208ENST00000494028 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
CLCN6-208ENST00000494028 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
CLCN6-208ENST00000494028 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 MAST3O60307 1309 aa12.81□□□□□ -0.36
CLCN6-208ENST00000494028 TAF5LO75529 589 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
CLCN6-208ENST00000494028 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
CLCN6-208ENST00000494028 NUCB2P80303 420 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 PKP1Q13835 747 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 SCARF1Q14162 830 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 TTC39AQ5SRH9 613 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 ZMYM1Q5SVZ6 1142 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
CLCN6-208ENST00000494028 GBP4Q96PP9 640 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLCN6-208ENST00000494028 TAF6LQ9Y6J9 622 aa12.8□□□□□ -0.36
CLCN6-208ENST00000494028 CPA1P15085 419 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
CLCN6-208ENST00000494028 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
CLCN6-208ENST00000494028 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
CLCN6-208ENST00000494028 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 LARGE1O95461 756 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 FGFR2P21802 821 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 KCNJ4P48050 445 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 KCNQ4P56696 695 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 ST3GAL1Q11201 340 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-208ENST00000494028 MCMDC2Q4G0Z9 681 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
CLCN6-208ENST00000494028 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 HELLSQ9NRZ9 838 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-208ENST00000494028 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
CLCN6-208ENST00000494028 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
CLCN6-208ENST00000494028 M0R2C6 588 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-208ENST00000494028 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-208ENST00000494028 GSE1Q14687 1217 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 CCDC158Q5M9N0 1113 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-208ENST00000494028 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
CLCN6-208ENST00000494028 LRRC37AA6NMS7 1700 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 PDE8BO95263 885 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms