RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CHRDQ9H2X0 955 aa8.11□□□□□ -1.11
ITGB1-216ENST00000493758 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
ITGB1-216ENST00000493758 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 TNFRSF21O75509 655 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 SIK1P57059 783 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 HYAL2Q12891 473 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 TTC16Q8NEE8 873 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
ITGB1-216ENST00000493758 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
ITGB1-216ENST00000493758 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
ITGB1-216ENST00000493758 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
ITGB1-216ENST00000493758 RASSF7Q02833 373 aa8.09□□□□□ -1.11
ITGB1-216ENST00000493758 GRIK5Q16478 980 aa8.09□□□□□ -1.11
ITGB1-216ENST00000493758 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
ITGB1-216ENST00000493758 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
ITGB1-216ENST00000493758 RGS9O75916 674 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-216ENST00000493758 CPB1P15086 417 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
ITGB1-216ENST00000493758 IRS1P35568 1242 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 AAMPQ13685 434 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 IGFLR1Q9H665 355 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-216ENST00000493758 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 DCTN4Q9UJW0 460 aa8.08□□□□□ -1.12
ITGB1-216ENST00000493758 A6NHS1 94 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 COL8A1P27658 744 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 MLLT1Q03111 559 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-216ENST00000493758 COL13A1Q5TAT6 717 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-216ENST00000493758 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 PLD4Q96BZ4 506 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 DMRTB1Q96MA1 342 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 CNTN3Q9P232 1028 aa8.07□□□□□ -1.12
ITGB1-216ENST00000493758 GHRHP01286 108 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 CYP2E1P05181 493 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-216ENST00000493758 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 CEP120Q8N960 986 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 C1orf127Q8N9H9 656 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 SUV39H2Q9H5I1 410 aa8.06□□□□□ -1.12
ITGB1-216ENST00000493758 GPR182O15218 404 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 PHACTR2O75167 634 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 NEFLP07196 543 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 CES1P23141 567 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 C8orf86Q6ZUL3 223 aa8.05□□□□□ -1.12
ITGB1-216ENST00000493758 SMG9Q9H0W8 520 aaKnown RBP8.05□□□□□ -1.12
ITGB1-216ENST00000493758 EDN3P14138 238 aa8.04□□□□□ -1.12
ITGB1-216ENST00000493758 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
ITGB1-216ENST00000493758 SPACA7Q96KW9 195 aa8.04□□□□□ -1.12
ITGB1-216ENST00000493758 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
ITGB1-216ENST00000493758 SRA1Q9HD15 236 aaKnown RBP8.04□□□□□ -1.12
ITGB1-216ENST00000493758 FOXD3Q9UJU5 478 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-216ENST00000493758 J3QW42 95 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 GDF11O95390 407 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 SND1Q7KZF4 910 aaKnown RBP eCLIP8.03□□□□□ -1.12
ITGB1-216ENST00000493758 TMEM151AQ8N4L1 468 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 PBX4Q9BYU1 374 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 DNAJC25Q9H1X3 360 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 KANSL3Q9P2N6 904 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 AMOTL2Q9Y2J4 779 aa8.03□□□□□ -1.12
ITGB1-216ENST00000493758 SMNDC1O75940 238 aaKnown RBP eCLIP8.02□□□□□ -1.133e-8■□□□□ 9.4
ITGB1-216ENST00000493758 BAG6P46379 1132 aa8.02□□□□□ -1.13
ITGB1-216ENST00000493758 TMC7Q7Z402 723 aa8.02□□□□□ -1.13
ITGB1-216ENST00000493758 NCAPG2Q86XI2 1143 aa8.02□□□□□ -1.13
ITGB1-216ENST00000493758 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.13
ITGB1-216ENST00000493758 DZANK1Q9NVP4 752 aa8.02□□□□□ -1.13
ITGB1-216ENST00000493758 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-216ENST00000493758 NFKBIEO00221 500 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 EREGO14944 169 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 TREHO43280 583 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 ATP11AP98196 1134 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 GALNT12Q8IXK2 581 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 MUC3BQ9H195 1237 aa8.01□□□□□ -1.13
ITGB1-216ENST00000493758 A0A0A0MRY4 1105 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 ELNP15502 786 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 DSC3Q14574 896 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
ITGB1-216ENST00000493758 TMEM102Q8N9M5 508 aaPredicted RBP8□□□□□ -1.13
ITGB1-216ENST00000493758 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
ITGB1-216ENST00000493758 ADAM19Q9H013 955 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
ITGB1-216ENST00000493758 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
ITGB1-216ENST00000493758 RAC1P63000 192 aa7.99□□□□□ -1.13
ITGB1-216ENST00000493758 PEAR1Q5VY43 1037 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-216ENST00000493758 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
ITGB1-216ENST00000493758 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
ITGB1-216ENST00000493758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-216ENST00000493758 CPNE3O75131 537 aaKnown RBP7.98□□□□□ -1.13
ITGB1-216ENST00000493758 ITGB2P05107 769 aa7.98□□□□□ -1.13
ITGB1-216ENST00000493758 MAPK1P28482 360 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms