RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 C4orf17Q53FE4 359 aa10.93□□□□□ -0.66
LRCH3-218ENST00000493726 WDR44Q5JSH3 913 aa10.93□□□□□ -0.66
LRCH3-218ENST00000493726 LYPD4Q6UWN0 246 aa10.93□□□□□ -0.66
LRCH3-218ENST00000493726 SIN3AQ96ST3 1273 aa10.93□□□□□ -0.66
LRCH3-218ENST00000493726 RGS12O14924 1447 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 QRICH2Q9H0J4 1663 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 H7C1W4 665 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 F11P03951 625 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 THBS1P07996 1170 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 SCNN1DP51172 638 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 PSME1Q06323 249 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 TRIM26Q12899 539 aaPredicted RBP10.92□□□□□ -0.66
LRCH3-218ENST00000493726 SAFB2Q14151 953 aaKnown RBP eCLIP10.92□□□□□ -0.66
LRCH3-218ENST00000493726 TLR1Q15399 786 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
LRCH3-218ENST00000493726 NUCKS1Q9H1E3 243 aaKnown RBP10.92□□□□□ -0.66
LRCH3-218ENST00000493726 RBM6P78332 1123 aaKnown RBP10.91□□□□□ -0.66
LRCH3-218ENST00000493726 SRSF11Q05519 484 aaKnown RBP10.91□□□□□ -0.66
LRCH3-218ENST00000493726 GNASQ5JWF2 1037 aa10.91□□□□□ -0.66
LRCH3-218ENST00000493726 FOXR1Q6PIV2 292 aa10.91□□□□□ -0.66
LRCH3-218ENST00000493726 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
LRCH3-218ENST00000493726 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.66
LRCH3-218ENST00000493726 RALGAPBQ86X10 1494 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 RXRBP28702 533 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
LRCH3-218ENST00000493726 SOX11P35716 441 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 GDF10P55107 478 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 XPCQ01831 940 aaPredicted RBP10.9□□□□□ -0.66
LRCH3-218ENST00000493726 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 NUDT16Q96DE0 195 aaKnown RBP10.9□□□□□ -0.66
LRCH3-218ENST00000493726 C8orf37Q96NL8 207 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 SSH2Q76I76 1423 aa10.9□□□□□ -0.66
LRCH3-218ENST00000493726 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 CENPJQ9HC77 1338 aaPredicted RBP10.89□□□□□ -0.67
LRCH3-218ENST00000493726 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 ARHGEF15O94989 841 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 SKIP12755 728 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 NBPF8Q3BBV2 869 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 CDK19Q9BWU1 502 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 RUBCNLQ9H714 662 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 QTRT2Q9H974 415 aaKnown RBP10.89□□□□□ -0.67
LRCH3-218ENST00000493726 GLI3P10071 1580 aa10.89□□□□□ -0.67
LRCH3-218ENST00000493726 POM121CA8CG34 1229 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 INHAP05111 366 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 PMFBP1Q8TBY8 1022 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 NGLY1Q96IV0 654 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 ALG2Q9H553 416 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 SERTAD1Q9UHV2 236 aa10.88□□□□□ -0.67
LRCH3-218ENST00000493726 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-218ENST00000493726 PHRF1Q9P1Y6 1649 aaKnown RBP10.87□□□□□ -0.67
LRCH3-218ENST00000493726 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
LRCH3-218ENST00000493726 RAD21O60216 631 aa10.87□□□□□ -0.67
LRCH3-218ENST00000493726 CELA2BP08218 269 aaPredicted RBP10.87□□□□□ -0.67
LRCH3-218ENST00000493726 RHBDD1Q8TEB9 315 aa10.87□□□□□ -0.67
LRCH3-218ENST00000493726 USP21Q9UK80 565 aa10.87□□□□□ -0.67
LRCH3-218ENST00000493726 COL14A1Q05707 1796 aaKnown RBP10.87□□□□□ -0.67
LRCH3-218ENST00000493726 MSX1P28360 303 aa10.86□□□□□ -0.67
LRCH3-218ENST00000493726 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
LRCH3-218ENST00000493726 GSK3AP49840 483 aa10.86□□□□□ -0.67
LRCH3-218ENST00000493726 USP19O94966 1318 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 ACEP12821 1306 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 TMEM229AB2RXF0 380 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 ADAMTS19Q8TE59 1207 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 ROCK2O75116 1388 aaKnown RBP10.85□□□□□ -0.67
LRCH3-218ENST00000493726 NRKQ7Z2Y5 1582 aa10.85□□□□□ -0.67
LRCH3-218ENST00000493726 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
LRCH3-218ENST00000493726 PPIP5K1Q6PFW1 1433 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 FLIIQ13045 1269 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 VPS72Q15906 364 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 DEPDC4Q8N2C3 294 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 PCDHGA11Q9Y5H2 935 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 CPDO75976 1380 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 USP6P35125 1406 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
LRCH3-218ENST00000493726 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 USP54Q70EL1 1684 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 MX2P20592 715 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 SMTNP53814 917 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 NCOA4Q13772 614 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 EML3Q32P44 896 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 PUS7Q96PZ0 661 aaKnown RBP10.83□□□□□ -0.68
LRCH3-218ENST00000493726 USP3Q9Y6I4 520 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 SLIT3O75094 1523 aa10.83□□□□□ -0.68
LRCH3-218ENST00000493726 FAM83GA6ND36 823 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 CSB-PGBD3P0DP91 1061 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 PGBD3Q8N328 593 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
LRCH3-218ENST00000493726 ACDQ96AP0 544 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
LRCH3-218ENST00000493726 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
LRCH3-218ENST00000493726 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms