RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 FOXO4P98177 505 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 POLA2Q14181 598 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.37
NEK4-205ENST00000493199 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 TICAM2Q86XR7 235 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 SP8Q8IXZ3 490 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 SMC5Q8IY18 1101 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 LPIN2Q92539 896 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 NEUROD6Q96NK8 337 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 ZC3H12CQ9C0D7 883 aaKnown RBP6.52□□□□□ -1.37
NEK4-205ENST00000493199 TNNQ9UQP3 1299 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 BCORQ6W2J9 1755 aa6.52□□□□□ -1.37
NEK4-205ENST00000493199 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 HIP1O00291 1037 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 PDE8BO95263 885 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 UQCRFS1P1P0C7P4 283 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 SRGNP10124 158 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 ATP2B4P23634 1241 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 CASP7P55210 303 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 PTPN12Q05209 780 aaKnown RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 TTF1Q15361 905 aaPredicted RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 CRY2Q49AN0 593 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 DALRD3Q5D0E6 543 aaKnown RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 B4GALNT3Q6L9W6 998 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 ZSCAN25Q6NSZ9 544 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 ZNF804AQ7Z570 1209 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 MPNDQ8N594 471 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 ZGPATQ8N5A5 531 aaKnown RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 SIL1Q9H173 461 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 GREM2Q9H772 168 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 NSFL1CQ9UNZ2 370 aaKnown RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 EXOC6BQ9Y2D4 811 aa6.51□□□□□ -1.37
NEK4-205ENST00000493199 N4BP2Q86UW6 1770 aaPredicted RBP6.51□□□□□ -1.37
NEK4-205ENST00000493199 XDHP47989 1333 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 APBB1O00213 710 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 PPEF1O14829 653 aaPredicted RBP6.5□□□□□ -1.37
NEK4-205ENST00000493199 SEMA3EO15041 775 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 GLRX3O76003 335 aaKnown RBP6.5□□□□□ -1.37
NEK4-205ENST00000493199 NUCB1Q02818 461 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 DDR1Q08345 913 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 ATP2B3Q16720 1220 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 FAM161AQ3B820 660 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 CCDC93Q567U6 631 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 TTC39AQ5SRH9 613 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 DPP8Q6V1X1 898 aaPredicted RBP6.5□□□□□ -1.37
NEK4-205ENST00000493199 SLF2Q8IX21 1173 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 JDP2Q8WYK2 163 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 JARID2Q92833 1246 aaPredicted RBP6.5□□□□□ -1.37
NEK4-205ENST00000493199 BCL11AQ9H165 835 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 UPF2Q9HAU5 1272 aaKnown RBP6.5□□□□□ -1.37
NEK4-205ENST00000493199 GGA1Q9UJY5 639 aa6.5□□□□□ -1.37
NEK4-205ENST00000493199 C6orf229H3BNL8 230 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 GRIN3BO60391 1043 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 MMP14P50281 582 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 MFAP1P55081 439 aaKnown RBP6.49□□□□□ -1.37
NEK4-205ENST00000493199 CHRNDQ07001 517 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 GPR162Q16538 588 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 SPTY2D1Q68D10 685 aaPredicted RBP6.49□□□□□ -1.37
NEK4-205ENST00000493199 AACSQ86V21 672 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 CNTROBQ8N137 903 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 RUFY2Q8WXA3 655 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.49□□□□□ -1.37
NEK4-205ENST00000493199 ECHDC1Q9NTX5 307 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 ATP6V0A2Q9Y487 856 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 C4AP0C0L4 1744 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 AOX1Q06278 1338 aa6.49□□□□□ -1.37
NEK4-205ENST00000493199 MYH3P11055 1940 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 TRIM6-TRIM34B2RNG4 842 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 IGHDP01880 384 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 MX1P20591 662 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 HIBADHP31937 336 aaKnown RBP6.48□□□□□ -1.37
NEK4-205ENST00000493199 TFCP2Q12800 502 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 WASHC4Q2M389 1173 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 EPHA10Q5JZY3 1008 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 IFFO2Q5TF58 517 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 SMIM5Q71RC9 77 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 CERS3Q8IU89 383 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.48□□□□□ -1.37
NEK4-205ENST00000493199 TBC1D22AQ8WUA7 517 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 KAZALD1Q96I82 304 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 NOL10Q9BSC4 688 aaKnown RBP6.48□□□□□ -1.37
NEK4-205ENST00000493199 LNPKQ9C0E8 428 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 PODXL2Q9NZ53 605 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 DENND2AQ9ULE3 1009 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 MINPP1Q9UNW1 487 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 RIPOR2Q9Y4F9 1068 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 ZNF804BA4D1E1 1349 aa6.48□□□□□ -1.37
NEK4-205ENST00000493199 ABCC12Q96J65 1359 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 A0A1B0GUL7 405 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 LDHCP07864 332 aa6.47□□□□□ -1.37
NEK4-205ENST00000493199 RFX5P48382 616 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms