RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MAP1SQ66K74 1059 aaPredicted RBP14.65□□□□□ -0.06
LRTM1-202ENST00000493075 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
LRTM1-202ENST00000493075 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
LRTM1-202ENST00000493075 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 CSF1RP07333 972 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 ATP2B4P23634 1241 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 BEND3Q5T5X7 828 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 ZC3H15Q8WU90 426 aaKnown RBP14.64□□□□□ -0.07
LRTM1-202ENST00000493075 BCL2L13Q9BXK5 485 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 GREM2Q9H772 168 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 PGAP2Q9UHJ9 254 aa14.64□□□□□ -0.07
LRTM1-202ENST00000493075 XDHP47989 1333 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 E9PSI1 815 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 CCER2I3L3R5 266 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 ECE2O60344 883 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 UFL1O94874 794 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 RPS12P25398 132 aaKnown RBP14.63□□□□□ -0.07
LRTM1-202ENST00000493075 DBNDD1Q9H9R9 158 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 CNOT7Q9UIV1 285 aaKnown RBP14.63□□□□□ -0.07
LRTM1-202ENST00000493075 MINPP1Q9UNW1 487 aa14.63□□□□□ -0.07
LRTM1-202ENST00000493075 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
LRTM1-202ENST00000493075 H7C1D1 291 aa14.62□□□□□ -0.07
LRTM1-202ENST00000493075 PSMD14O00487 310 aa14.62□□□□□ -0.07
LRTM1-202ENST00000493075 DOK7Q18PE1 504 aa14.62□□□□□ -0.07
LRTM1-202ENST00000493075 ADAMTSL1Q8N6G6 1762 aa14.61□□□□□ -0.07
LRTM1-202ENST00000493075 F6X3S4 739 aa14.61□□□□□ -0.07
LRTM1-202ENST00000493075 G3V3G9 751 aa14.61□□□□□ -0.07
LRTM1-202ENST00000493075 VIL1P09327 827 aaKnown RBP14.61□□□□□ -0.07
LRTM1-202ENST00000493075 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
LRTM1-202ENST00000493075 IGHMBP2P38935 993 aaKnown RBP14.61□□□□□ -0.07
LRTM1-202ENST00000493075 DCAF8Q5TAQ9 597 aa14.61□□□□□ -0.07
LRTM1-202ENST00000493075 COL4A1P02462 1669 aa14.61□□□□□ -0.07
LRTM1-202ENST00000493075 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 ALDH1L1O75891 902 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 ITGA6P23229 1130 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 HIRAP54198 1017 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-202ENST00000493075 SLFN5Q08AF3 891 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 PODNQ7Z5L7 613 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 GPR101Q96P66 508 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-202ENST00000493075 KCNQ5Q9NR82 932 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
LRTM1-202ENST00000493075 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-202ENST00000493075 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
LRTM1-202ENST00000493075 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
LRTM1-202ENST00000493075 MICALL2Q8IY33 904 aa14.59□□□□□ -0.07
LRTM1-202ENST00000493075 ANKRD2Q9GZV1 360 aa14.59□□□□□ -0.07
LRTM1-202ENST00000493075 MKRN1Q9UHC7 482 aaKnown RBP14.59□□□□□ -0.07
LRTM1-202ENST00000493075 TAF1P21675 1872 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 GRM8O00222 908 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 CCT4P50991 539 aaKnown RBP14.58□□□□□ -0.08
LRTM1-202ENST00000493075 FOXO4P98177 505 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 DEFB115Q30KQ5 88 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 MPHOSPH8Q99549 860 aa14.58□□□□□ -0.08
LRTM1-202ENST00000493075 FAM161AQ3B820 660 aa14.57□□□□□ -0.08
LRTM1-202ENST00000493075 CDC37L1Q7L3B6 337 aa14.57□□□□□ -0.08
LRTM1-202ENST00000493075 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
LRTM1-202ENST00000493075 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
LRTM1-202ENST00000493075 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
LRTM1-202ENST00000493075 TRPM4Q8TD43 1214 aa14.57□□□□□ -0.08
LRTM1-202ENST00000493075 SRCIN1Q9C0H9 1055 aa14.57□□□□□ -0.08
LRTM1-202ENST00000493075 C9orf78Q9NZ63 289 aaPredicted RBP14.57□□□□□ -0.08
LRTM1-202ENST00000493075 MED23Q9ULK4 1368 aa14.56□□□□□ -0.08
LRTM1-202ENST00000493075 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
LRTM1-202ENST00000493075 IFIT5Q13325 482 aaKnown RBP14.56□□□□□ -0.08
LRTM1-202ENST00000493075 CST9Q5W186 159 aa14.56□□□□□ -0.08
LRTM1-202ENST00000493075 RSBN1LQ6PCB5 846 aaPredicted RBP14.56□□□□□ -0.08
LRTM1-202ENST00000493075 SAMD7Q7Z3H4 446 aa14.56□□□□□ -0.08
LRTM1-202ENST00000493075 PTPRCP08575 1304 aa14.56□□□□□ -0.08
LRTM1-202ENST00000493075 ZNF609O15014 1411 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 WTIPA6NIX2 430 aaPredicted RBP14.55□□□□□ -0.08
LRTM1-202ENST00000493075 TRAF5O00463 557 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 VEGFBP49765 207 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 ZNF280AP59817 542 aaPredicted RBP14.55□□□□□ -0.08
LRTM1-202ENST00000493075 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 GMLQ99445 158 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 COA1Q9GZY4 146 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 ZNF804BA4D1E1 1349 aa14.55□□□□□ -0.08
LRTM1-202ENST00000493075 CT47B1P0C2W7 299 aaPredicted RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 MMP14P50281 582 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 FMR1Q06787 632 aaKnown RBP eCLIP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 CHRNDQ07001 517 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 TBC1D10BQ4KMP7 808 aaPredicted RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 IFFO2Q5TF58 517 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 GLIS2Q9BZE0 524 aaPredicted RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 ABT1Q9ULW3 272 aaKnown RBP14.54□□□□□ -0.08
LRTM1-202ENST00000493075 TLL2Q9Y6L7 1015 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 UTYO14607 1347 aa14.54□□□□□ -0.08
LRTM1-202ENST00000493075 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
LRTM1-202ENST00000493075 EPHA10Q5JZY3 1008 aa14.53□□□□□ -0.08
LRTM1-202ENST00000493075 STRIP1Q5VSL9 837 aa14.53□□□□□ -0.08
LRTM1-202ENST00000493075 C15orf52Q6ZUT6 534 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms