RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KBTBD3Q8NAB2 608 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 DSG3P32926 999 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 PTH1RQ03431 593 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
PTPN7-216ENST00000492977 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
PTPN7-216ENST00000492977 PAG1Q9NWQ8 432 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
PTPN7-216ENST00000492977 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-216ENST00000492977 IFIT1P09914 478 aaKnown RBP16.91■□□□□ 0.3
PTPN7-216ENST00000492977 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-216ENST00000492977 GORABQ5T7V8 394 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-216ENST00000492977 RIC1Q4ADV7 1423 aa16.91■□□□□ 0.3
PTPN7-216ENST00000492977 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 KCNQ4P56696 695 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
PTPN7-216ENST00000492977 LAMB2P55268 1798 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 LY75O60449 1722 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
PTPN7-216ENST00000492977 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.3
PTPN7-216ENST00000492977 VGLL2Q8N8G2 317 aa16.89■□□□□ 0.3
PTPN7-216ENST00000492977 NARFQ9UHQ1 456 aa16.89■□□□□ 0.3
PTPN7-216ENST00000492977 DDX60Q8IY21 1712 aaKnown RBP16.89■□□□□ 0.29
PTPN7-216ENST00000492977 LRP5O75197 1615 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 GOLIM4O00461 696 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 PDE8BO95263 885 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
PTPN7-216ENST00000492977 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 DDX46Q7L014 1031 aaKnown RBP16.89■□□□□ 0.29
PTPN7-216ENST00000492977 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 SPOCK2Q92563 424 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-216ENST00000492977 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
PTPN7-216ENST00000492977 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
PTPN7-216ENST00000492977 ADORA1P30542 326 aa16.88■□□□□ 0.29
PTPN7-216ENST00000492977 ZNF512BQ96KM6 892 aaPredicted RBP16.88■□□□□ 0.29
PTPN7-216ENST00000492977 HELLSQ9NRZ9 838 aa16.88■□□□□ 0.29
PTPN7-216ENST00000492977 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
PTPN7-216ENST00000492977 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
PTPN7-216ENST00000492977 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
PTPN7-216ENST00000492977 TAF1LQ8IZX4 1826 aa16.87■□□□□ 0.29
PTPN7-216ENST00000492977 TAF5LO75529 589 aa16.87■□□□□ 0.29
PTPN7-216ENST00000492977 KCNJ4P48050 445 aa16.87■□□□□ 0.29
PTPN7-216ENST00000492977 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
PTPN7-216ENST00000492977 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
PTPN7-216ENST00000492977 TMX3Q96JJ7 454 aa16.87■□□□□ 0.29
PTPN7-216ENST00000492977 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
PTPN7-216ENST00000492977 GNPATO15228 680 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 ZPR1O75312 459 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 SSFA2P28290 1259 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
PTPN7-216ENST00000492977 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
PTPN7-216ENST00000492977 IGHMBP2P38935 993 aaKnown RBP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 CUL4AQ13619 759 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 PUM3Q15397 648 aaKnown RBP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 TSGA10IPQ3SY00 556 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 SLC10A5Q5PT55 438 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 TTC14Q96N46 770 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 FGFR2P21802 821 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 SF3B3Q15393 1217 aaKnown RBP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 FAM196AQ6ZSG2 479 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 LPIN2Q92539 896 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 INTS4Q96HW7 963 aaKnown RBP16.85■□□□□ 0.29
PTPN7-216ENST00000492977 ZSWIM6Q9HCJ5 1215 aa16.85■□□□□ 0.29
PTPN7-216ENST00000492977 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 SLC27A2O14975 620 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-216ENST00000492977 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 PSMA5P28066 241 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 NUCB2P80303 420 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 ERFEQ4G0M1 354 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 TBC1D9BQ66K14 1250 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms