RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 HCN4Q9Y3Q4 1203 aa9.96□□□□□ -0.82
TPR-208ENST00000492973 GPC6Q9Y625 555 aaPredicted RBP9.96□□□□□ -0.82
TPR-208ENST00000492973 TRPM2O94759 1503 aa9.96□□□□□ -0.82
TPR-208ENST00000492973 MYO3AQ8NEV4 1616 aa9.96□□□□□ -0.82
TPR-208ENST00000492973 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
TPR-208ENST00000492973 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
TPR-208ENST00000492973 ARSJQ5FYB0 599 aaPredicted RBP9.95□□□□□ -0.82
TPR-208ENST00000492973 NLRP8Q86W28 1048 aa9.95□□□□□ -0.82
TPR-208ENST00000492973 CEP170BQ9Y4F5 1589 aaPredicted RBP9.95□□□□□ -0.82
TPR-208ENST00000492973 WIPF1O43516 503 aa9.94□□□□□ -0.82
TPR-208ENST00000492973 KRT76Q01546 638 aa9.94□□□□□ -0.82
TPR-208ENST00000492973 GAS6Q14393 721 aa9.94□□□□□ -0.82
TPR-208ENST00000492973 ALDH16A1Q8IZ83 802 aa9.94□□□□□ -0.82
TPR-208ENST00000492973 THEMISQ8N1K5 641 aaPredicted RBP9.94□□□□□ -0.82
TPR-208ENST00000492973 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
TPR-208ENST00000492973 CXXC1Q9P0U4 656 aaPredicted RBP9.94□□□□□ -0.82
TPR-208ENST00000492973 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
TPR-208ENST00000492973 BICDL1Q6ZP65 573 aa9.93□□□□□ -0.82
TPR-208ENST00000492973 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
TPR-208ENST00000492973 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
TPR-208ENST00000492973 CCDC144AA2RUR9 1427 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 TMEM2Q9UHN6 1383 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 GPR25O00155 361 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 FOXR1Q6PIV2 292 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
TPR-208ENST00000492973 ADGRB3O60242 1522 aa9.92□□□□□ -0.82
TPR-208ENST00000492973 CFAP65Q6ZU64 1925 aaKnown RBP9.92□□□□□ -0.82
TPR-208ENST00000492973 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
TPR-208ENST00000492973 ATP2B4P23634 1241 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 LTKP29376 864 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 RTN1Q16799 776 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 SAMD5Q5TGI4 173 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 NGLY1Q96IV0 654 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
TPR-208ENST00000492973 USTQ9Y2C2 406 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 CLTCL1P53675 1640 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 ARHGAP23Q9P227 1491 aa9.91□□□□□ -0.82
TPR-208ENST00000492973 SPATA31E1Q6ZUB1 1445 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 SPHKAPQ2M3C7 1700 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 TRERF1Q96PN7 1200 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 CFHR5Q9BXR6 569 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 QTRT2Q9H974 415 aaKnown RBP9.9□□□□□ -0.82
TPR-208ENST00000492973 PCDHGC4Q9Y5F7 938 aa9.9□□□□□ -0.82
TPR-208ENST00000492973 TMEM131LA2VDJ0 1609 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 SLIT1O75093 1534 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 BNIP3LO60238 219 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 MYO19Q96H55 970 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 ZFYVE9O95405 1425 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 RIMS2Q9UQ26 1411 aa9.89□□□□□ -0.83
TPR-208ENST00000492973 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
TPR-208ENST00000492973 UBR1Q8IWV7 1749 aa9.88□□□□□ -0.83
TPR-208ENST00000492973 ATXN7O15265 892 aaPredicted RBP9.88□□□□□ -0.83
TPR-208ENST00000492973 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
TPR-208ENST00000492973 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
TPR-208ENST00000492973 ATXN7L1Q9ULK2 861 aaPredicted RBP9.88□□□□□ -0.83
TPR-208ENST00000492973 FAM157BP0CG42 384 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 SSFA2P28290 1259 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
TPR-208ENST00000492973 ZNF326Q5BKZ1 582 aaKnown RBP9.87□□□□□ -0.83
TPR-208ENST00000492973 CAPN12Q6ZSI9 719 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 ABHD17AQ96GS6 310 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 SUSD3Q96L08 255 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 CNTNAP3BQ96NU0 1288 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 CNTNAP3Q9BZ76 1288 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 HCN2Q9UL51 889 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 PHF24Q9UPV7 400 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 GJA3Q9Y6H8 435 aa9.87□□□□□ -0.83
TPR-208ENST00000492973 RPGRIP1LQ68CZ1 1315 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
TPR-208ENST00000492973 EFSO43281 561 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 TNP2Q05952 138 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPR-208ENST00000492973 MKNK1Q9BUB5 465 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.86□□□□□ -0.831e-8■■■□□ 15.1
TPR-208ENST00000492973 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 ANKIB1Q9P2G1 1089 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 EID1Q9Y6B2 187 aa9.86□□□□□ -0.83
TPR-208ENST00000492973 KDM5AP29375 1690 aaKnown RBP9.86□□□□□ -0.83
TPR-208ENST00000492973 NPHP4O75161 1426 aaPredicted RBP9.85□□□□□ -0.83
TPR-208ENST00000492973 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
TPR-208ENST00000492973 HIF1AQ16665 826 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 PHLDB3Q6NSJ2 640 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 NEUROD4Q9HD90 331 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 LRFN2Q9ULH4 789 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 BCS1LQ9Y276 419 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 MED14O60244 1454 aa9.85□□□□□ -0.83
TPR-208ENST00000492973 NEURL4Q96JN8 1562 aa9.84□□□□□ -0.83
TPR-208ENST00000492973 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
TPR-208ENST00000492973 MAPTP10636 758 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms