RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 USPL1Q5W0Q7 1092 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 KBTBD3Q8NAB2 608 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 SRP68Q9UHB9 627 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 TNS1Q9HBL0 1735 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 A0A0D9SFI3 127 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 IGHMBP2P38935 993 aaKnown RBP11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 RBM6P78332 1123 aaKnown RBP11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 NBR1Q14596 966 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 TBC1D9BQ66K14 1250 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 IL27Q8NEV9 243 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
SMARCC1-208ENST00000492896 LAMA4Q16363 1823 aa11.02□□□□□ -0.64
SMARCC1-208ENST00000492896 COL4A1P02462 1669 aa11.02□□□□□ -0.64
SMARCC1-208ENST00000492896 GOLIM4O00461 696 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 PDE8BO95263 885 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 HSP90AA1P07900 732 aaKnown RBP11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 ADRA2BP18089 450 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 MCM2P49736 904 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 ERFEQ4G0M1 354 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 SETDB2Q96T68 719 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 CDC5LQ99459 802 aaKnown RBP11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 CHMP5Q9NZZ3 219 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 NDUFB9Q9Y6M9 179 aa11.02□□□□□ -0.65
SMARCC1-208ENST00000492896 SLC5A1P13866 664 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 RFC4P35249 363 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 PTH1RQ03431 593 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 LRRFIP1Q32MZ4 808 aaKnown RBP11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 SEC31BQ9NQW1 1179 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 CIZ1Q9ULV3 898 aaPredicted RBP11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 SNX14Q9Y5W7 946 aa11.01□□□□□ -0.65
SMARCC1-208ENST00000492896 PHF14O94880 888 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 TRIM37O94972 964 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 KCNJ4P48050 445 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 NEK4P51957 841 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
SMARCC1-208ENST00000492896 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 AMIGO3Q86WK7 504 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 NBPF5PQ86XG9 351 aaPredicted RBP11□□□□□ -0.65
SMARCC1-208ENST00000492896 LPIN2Q92539 896 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 KCNB2Q92953 911 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 ZNF512BQ96KM6 892 aaPredicted RBP11□□□□□ -0.65
SMARCC1-208ENST00000492896 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 RBM8AQ9Y5S9 174 aaKnown RBP11□□□□□ -0.65
SMARCC1-208ENST00000492896 CARMIL3Q8ND23 1372 aa11□□□□□ -0.65
SMARCC1-208ENST00000492896 UQCRFS1P1P0C7P4 283 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 FGFR2P21802 821 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 FKBP4Q02790 459 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 MCMDC2Q4G0Z9 681 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 ANKRD18AQ8IVF6 992 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
SMARCC1-208ENST00000492896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 TAF5LO75529 589 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 ZFYP08048 801 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 SSFA2P28290 1259 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 ARID4AP29374 1257 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 DDIT3P35638 169 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 SCARF1Q14162 830 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 ZMYM1Q5SVZ6 1142 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 TPTE2Q6XPS3 522 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 UPF3BQ9BZI7 483 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
SMARCC1-208ENST00000492896 CHD4Q14839 1912 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 SLC27A2O14975 620 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 NPHP1O15259 732 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms