RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 ZNF280DQ6N043 979 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 BRAPQ7Z569 592 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
CSMD3-206ENST00000492692 PYGLP06737 847 aa12.83□□□□□ -0.35
CSMD3-206ENST00000492692 PEX19P40855 299 aa12.83□□□□□ -0.35
CSMD3-206ENST00000492692 MIPOL1Q8TD10 442 aa12.83□□□□□ -0.35
CSMD3-206ENST00000492692 STK31Q9BXU1 1019 aa12.83□□□□□ -0.35
CSMD3-206ENST00000492692 H3BQF6 201 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 EXOC5O00471 708 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 TADA3O75528 432 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 FSBPO95073 299 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 TPP2P29144 1249 aaPredicted RBP12.83□□□□□ -0.36
CSMD3-206ENST00000492692 KCNJ6P48051 423 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 GNAI1P63096 354 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 LRMPQ12912 555 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
CSMD3-206ENST00000492692 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 BICD1Q96G01 975 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 RMDN2Q96LZ7 410 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
CSMD3-206ENST00000492692 MAP3K4Q9Y6R4 1608 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 OPA1O60313 960 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSMD3-206ENST00000492692 FBXW10Q5XX13 1052 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 CCDC50Q8IVM0 306 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
CSMD3-206ENST00000492692 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 MYL1P05976 194 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ZNF75DP51815 510 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 NEXNQ0ZGT2 675 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 MFSD4BQ5TF39 518 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ATF7IPQ6VMQ6 1270 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 CCAR2Q8N163 923 aaKnown RBP12.81□□□□□ -0.36
CSMD3-206ENST00000492692 CEP112Q8N8E3 955 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 FAM81AQ8TBF8 368 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
CSMD3-206ENST00000492692 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 OSBPL9Q96SU4 736 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 TET3O43151 1660 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
CSMD3-206ENST00000492692 FNTAP49354 379 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 LIG3P49916 1009 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 BRD3Q15059 726 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 DBN1Q16643 649 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 FAM71BQ8TC56 605 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ZBTB10Q96DT7 871 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
CSMD3-206ENST00000492692 NSD2O96028 1365 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 PHLPP2Q6ZVD8 1323 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 SMAPO00193 183 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 INPP5BP32019 993 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 SNX1Q13596 522 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 TSNAXIP1Q2TAA8 658 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 CWF19L1Q69YN2 538 aaKnown RBP12.8□□□□□ -0.36
CSMD3-206ENST00000492692 B4GALNT2Q8NHY0 566 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
CSMD3-206ENST00000492692 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
CSMD3-206ENST00000492692 GCC1Q96CN9 775 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 NOS1P29475 1434 aa12.8□□□□□ -0.36
CSMD3-206ENST00000492692 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 SEC31AO94979 1220 aaKnown RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 CCDC15Q0P6D6 951 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 PLCB4Q15147 1175 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 SPATS2Q86XZ4 545 aaKnown RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 VPS18Q9P253 973 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
CSMD3-206ENST00000492692 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
CSMD3-206ENST00000492692 CCDC151A5D8V7 595 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 ST18O60284 1047 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 TRIM27P14373 513 aa12.78□□□□□ -0.36
CSMD3-206ENST00000492692 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms