RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 H7C1D1 291 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 AOC2O75106 756 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 BBOX1O75936 387 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
TNFRSF9-203ENST00000492571 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 CXCL9Q07325 125 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 NOGQ13253 232 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 DGKZQ13574 1117 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 MCOLN1Q9GZU1 580 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
TNFRSF9-203ENST00000492571 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 MPNDQ8N594 471 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
TNFRSF9-203ENST00000492571 RIC1Q4ADV7 1423 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 PPP1R37O75864 691 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 ADAMTSL1Q8N6G6 1762 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
TNFRSF9-203ENST00000492571 RAD17O75943 681 aa12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 NTSR2O95665 410 aa12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 HUNKP57058 714 aa12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 CNOT7Q9UIV1 285 aaKnown RBP12.82□□□□□ -0.36
TNFRSF9-203ENST00000492571 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 SNED1Q8TER0 1413 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 CCDC102AQ96A19 550 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
TNFRSF9-203ENST00000492571 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
TNFRSF9-203ENST00000492571 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
TNFRSF9-203ENST00000492571 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
TNFRSF9-203ENST00000492571 ABCC4O15439 1325 aa12.8□□□□□ -0.36
TNFRSF9-203ENST00000492571 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
TNFRSF9-203ENST00000492571 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
TNFRSF9-203ENST00000492571 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
TNFRSF9-203ENST00000492571 HIRAP54198 1017 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 GRAPQ13588 217 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 WASHC4Q2M389 1173 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 DPF2Q92785 391 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
TNFRSF9-203ENST00000492571 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 ZNF157P51786 506 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 COL4A5P29400 1685 aa12.77□□□□□ -0.37
TNFRSF9-203ENST00000492571 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 AIMP1Q12904 312 aaKnown RBP12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 TRPM4Q8TD43 1214 aa12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 EYA3Q99504 573 aa12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
TNFRSF9-203ENST00000492571 TRPA1O75762 1119 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 KIF23Q02241 960 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
TNFRSF9-203ENST00000492571 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms