RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ACAD11Q709F0 780 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 GIMAP7Q8NHV1 300 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 GLMNQ92990 594 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 TLR7Q9NYK1 1049 aaKnown RBP5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 DMGDHQ9UI17 866 aaKnown RBP5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 PPME1Q9Y570 386 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 RASA1P20936 1047 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 ARMC10Q8N2F6 343 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 ASIC4Q96FT7 647 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 MKRN1Q9UHC7 482 aaKnown RBP5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 BCS1LQ9Y276 419 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 HMX2A2RU54 273 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 J3QW42 95 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 SART1O43290 800 aaKnown RBP5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 SEC13P55735 322 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 MYRFLQ96LU7 910 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 NSUN5Q96P11 429 aaKnown RBP5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 UCN2Q96RP3 112 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 HINFPQ9BQA5 517 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 KCNF1Q9H3M0 494 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 KLK14Q9P0G3 267 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 PRR19A6NJB7 356 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 MICAL2O94851 1124 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 C8AP07357 584 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 GRNP28799 593 aaKnown RBP5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 CD68P34810 354 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 HDGFL1Q5TGJ6 251 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM117BQ6P1L5 589 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 CLEC10AQ8IUN9 316 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 SHKBP1Q8TBC3 707 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM177BA6PVY3 158 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 XYLBO75191 536 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 DGKZQ13574 1117 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 ABI1Q8IZP0 508 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 POU5F2Q8N7G0 328 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM46AQ96IP4 442 aaKnown RBP5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 ARID3AQ99856 593 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM83CQ9BQN1 747 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 TRIM33Q9UPN9 1127 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 LINC01387J3KSC0 135 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 ATP9BO43861 1147 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 SOX18P35713 384 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 DUOXA2Q1HG44 320 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 CALR3Q96L12 384 aaKnown RBP5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 ATG3Q9NT62 314 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 RTCBQ9Y3I0 505 aaKnown RBP5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 WDR64B1ANS9 1081 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 WISP1O95388 367 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 EGFRP00533 1210 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 IGFBP4P22692 258 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 BEND4Q6ZU67 534 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 FAM20CQ8IXL6 584 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 FBXL18Q96ME1 805 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 PIM2Q9P1W9 311 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 LEMD3Q9Y2U8 911 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 BMP3P12645 472 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 JUNBP17275 347 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 C11orf91Q3C1V1 193 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 CFAP70Q5T0N1 1121 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 TP53INP2Q8IXH6 220 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 RGL4Q8IZJ4 473 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 GALNT11Q8NCW6 608 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 HIF3AQ9Y2N7 669 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 MMP20O60882 483 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SMNDC1O75940 238 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 HOXD8P13378 290 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 CDC27P30260 824 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SRPK2P78362 688 aaKnown RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 ANKRD34AQ69YU3 496 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 LARP1Q6PKG0 1096 aaKnown RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SERPINA10Q9UK55 444 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 GAS2O43903 313 aaKnown RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CPSF6Q16630 551 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 FDX2Q6P4F2 183 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 TXNDC11Q6PKC3 985 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CCDC97Q96F63 343 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CARD10Q9BWT7 1032 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 OSBPL1AQ9BXW6 950 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 PPP1R12CQ9BZL4 782 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 LACRTQ9GZZ8 138 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 FSCN2O14926 492 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 DKK1O94907 266 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 CDC25BP30305 580 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 KIAA1211Q6ZU35 1233 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 MFSD14AQ96MC6 490 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 USP20Q9Y2K6 914 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 OPLAHO14841 1288 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 HYAL2Q12891 473 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 NLRP13Q86W25 1043 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 TREML1Q86YW5 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms