RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ACAD11Q709F0 780 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 GIMAP7Q8NHV1 300 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 GLMNQ92990 594 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 TLR7Q9NYK1 1049 aaKnown RBP5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 DMGDHQ9UI17 866 aaKnown RBP5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 PPME1Q9Y570 386 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 RASA1P20936 1047 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 ARMC10Q8N2F6 343 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 ASIC4Q96FT7 647 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 MKRN1Q9UHC7 482 aaKnown RBP5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 BCS1LQ9Y276 419 aa5.76□□□□□ -1.49
HMGB1P30-201ENST00000492455 HMX2A2RU54 273 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 J3QW42 95 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 SART1O43290 800 aaKnown RBP5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 SEC13P55735 322 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 MYRFLQ96LU7 910 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 NSUN5Q96P11 429 aaKnown RBP5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 UCN2Q96RP3 112 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 HINFPQ9BQA5 517 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 KCNF1Q9H3M0 494 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 KLK14Q9P0G3 267 aa5.75□□□□□ -1.49
HMGB1P30-201ENST00000492455 PRR19A6NJB7 356 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 MICAL2O94851 1124 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 C8AP07357 584 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 GRNP28799 593 aaKnown RBP5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 CD68P34810 354 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 HDGFL1Q5TGJ6 251 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM117BQ6P1L5 589 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 CLEC10AQ8IUN9 316 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 SHKBP1Q8TBC3 707 aa5.74□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM177BA6PVY3 158 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 XYLBO75191 536 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 DGKZQ13574 1117 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 ABI1Q8IZP0 508 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 POU5F2Q8N7G0 328 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM46AQ96IP4 442 aaKnown RBP5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 ARID3AQ99856 593 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 FAM83CQ9BQN1 747 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 TRIM33Q9UPN9 1127 aa5.73□□□□□ -1.49
HMGB1P30-201ENST00000492455 LINC01387J3KSC0 135 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 ATP9BO43861 1147 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 SOX18P35713 384 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 DUOXA2Q1HG44 320 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 CALR3Q96L12 384 aaKnown RBP5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 ATG3Q9NT62 314 aa5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 RTCBQ9Y3I0 505 aaKnown RBP5.72□□□□□ -1.49
HMGB1P30-201ENST00000492455 WDR64B1ANS9 1081 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 WISP1O95388 367 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 EGFRP00533 1210 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 IGFBP4P22692 258 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 BEND4Q6ZU67 534 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 FAM20CQ8IXL6 584 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 FBXL18Q96ME1 805 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 PIM2Q9P1W9 311 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 LEMD3Q9Y2U8 911 aa5.71□□□□□ -1.5
HMGB1P30-201ENST00000492455 BMP3P12645 472 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 JUNBP17275 347 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 C11orf91Q3C1V1 193 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 CFAP70Q5T0N1 1121 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 TP53INP2Q8IXH6 220 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 RGL4Q8IZJ4 473 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 GALNT11Q8NCW6 608 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 SPACA7Q96KW9 195 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 HIF3AQ9Y2N7 669 aa5.7□□□□□ -1.5
HMGB1P30-201ENST00000492455 MMP20O60882 483 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SMNDC1O75940 238 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 HOXD8P13378 290 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 CDC27P30260 824 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SRPK2P78362 688 aaKnown RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 ANKRD34AQ69YU3 496 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 LARP1Q6PKG0 1096 aaKnown RBP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 SERPINA10Q9UK55 444 aa5.69□□□□□ -1.5
HMGB1P30-201ENST00000492455 GAS2O43903 313 aaKnown RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CPSF6Q16630 551 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 FDX2Q6P4F2 183 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 TXNDC11Q6PKC3 985 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CCDC97Q96F63 343 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 CARD10Q9BWT7 1032 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 OSBPL1AQ9BXW6 950 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 PPP1R12CQ9BZL4 782 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 LACRTQ9GZZ8 138 aa5.68□□□□□ -1.5
HMGB1P30-201ENST00000492455 FSCN2O14926 492 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 DKK1O94907 266 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 CDC25BP30305 580 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 KIAA1211Q6ZU35 1233 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 MFSD14AQ96MC6 490 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 USP20Q9Y2K6 914 aa5.67□□□□□ -1.5
HMGB1P30-201ENST00000492455 OPLAHO14841 1288 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 HYAL2Q12891 473 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 NLRP13Q86W25 1043 aa5.66□□□□□ -1.5
HMGB1P30-201ENST00000492455 TREML1Q86YW5 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms