RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 LARGE1O95461 756 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 HCLS1P14317 486 aaPredicted RBP12.13□□□□□ -0.47
SREBF2-208ENST00000491541 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 TPM1P09493 284 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
SREBF2-208ENST00000491541 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
SREBF2-208ENST00000491541 TADA3O75528 432 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 KCNJ4P48050 445 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
SREBF2-208ENST00000491541 MYH6P13533 1939 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
SREBF2-208ENST00000491541 HPSEQ9Y251 543 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
SREBF2-208ENST00000491541 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
SREBF2-208ENST00000491541 REXO1L1PQ8IX06 675 aa12.12□□□□□ -0.47
SREBF2-208ENST00000491541 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 SHOX2O60902 331 aaPredicted RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.478e-6■□□□□ 10.3
SREBF2-208ENST00000491541 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 ZC3H4Q9UPT8 1303 aaKnown RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 ME3Q16798 604 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
SREBF2-208ENST00000491541 CCDC150Q8NCX0 1101 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
SREBF2-208ENST00000491541 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 EFCAB8A8MWE9 144 aa12.1□□□□□ -0.47
SREBF2-208ENST00000491541 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 EXOC4Q96A65 974 aa12.1□□□□□ -0.47
SREBF2-208ENST00000491541 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 PFKFB2O60825 505 aa12.1□□□□□ -0.47
SREBF2-208ENST00000491541 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 GSCP56915 257 aaPredicted RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
SREBF2-208ENST00000491541 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
SREBF2-208ENST00000491541 TACO1Q9BSH4 297 aaKnown RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 FEZ2Q9UHY8 353 aaPredicted RBP12.1□□□□□ -0.47
SREBF2-208ENST00000491541 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
SREBF2-208ENST00000491541 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
SREBF2-208ENST00000491541 C1orf131Q8NDD1 294 aaKnown RBP12.09□□□□□ -0.47
SREBF2-208ENST00000491541 ORC3Q9UBD5 711 aaPredicted RBP12.09□□□□□ -0.47
SREBF2-208ENST00000491541 DNAI1Q9UI46 699 aa12.09□□□□□ -0.47
SREBF2-208ENST00000491541 CPDO75976 1380 aa12.09□□□□□ -0.47
SREBF2-208ENST00000491541 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
SREBF2-208ENST00000491541 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
SREBF2-208ENST00000491541 FLIIQ13045 1269 aa12.08□□□□□ -0.47
SREBF2-208ENST00000491541 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.47
SREBF2-208ENST00000491541 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.47
SREBF2-208ENST00000491541 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.47
SREBF2-208ENST00000491541 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.47
SREBF2-208ENST00000491541 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.47
SREBF2-208ENST00000491541 TPCN1Q9ULQ1 816 aa12.08□□□□□ -0.47
SREBF2-208ENST00000491541 NPHP1O15259 732 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 CCP110O43303 1012 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 PBX1P40424 430 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 CEP135Q66GS9 1140 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 KRT85P78386 507 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
SREBF2-208ENST00000491541 ZNF609O15014 1411 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
SREBF2-208ENST00000491541 TNNT3P45378 269 aaPredicted RBP12.07□□□□□ -0.48
SREBF2-208ENST00000491541 CNTROBQ8N137 903 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
SREBF2-208ENST00000491541 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 PNMA6AP0CW24 399 aaPredicted RBP12.07□□□□□ -0.48
SREBF2-208ENST00000491541 LIG1P18858 919 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 PTGS1P23219 599 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 GJB2P29033 226 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 STX1AQ16623 288 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 G2E3Q7L622 706 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 CCDC112Q8NEF3 446 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 XAGE2Q96GT9 111 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
SREBF2-208ENST00000491541 KAZALD1Q96I82 304 aa12.06□□□□□ -0.48
SREBF2-208ENST00000491541 MYH7BA7E2Y1 1941 aa12.06□□□□□ -0.48
SREBF2-208ENST00000491541 SH2B2O14492 632 aaPredicted RBP12.06□□□□□ -0.48
SREBF2-208ENST00000491541 JAKMIP3Q5VZ66 844 aa12.06□□□□□ -0.48
SREBF2-208ENST00000491541 C16orf45Q96MC5 204 aaPredicted RBP12.06□□□□□ -0.48
SREBF2-208ENST00000491541 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
SREBF2-208ENST00000491541 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms