RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ECE2O60344 883 aa21.03■□□□□ 0.96
PDLIM2-217ENST00000491330 TTLL11Q8NHH1 800 aa21.03■□□□□ 0.96
PDLIM2-217ENST00000491330 BSDC1Q9NW68 430 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-217ENST00000491330 MKRN1Q9UHC7 482 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-217ENST00000491330 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
PDLIM2-217ENST00000491330 ANKRD2Q9GZV1 360 aa21.02■□□□□ 0.96
PDLIM2-217ENST00000491330 E9PSI1 815 aa21.01■□□□□ 0.95
PDLIM2-217ENST00000491330 DEFB115Q30KQ5 88 aa21.01■□□□□ 0.95
PDLIM2-217ENST00000491330 SLC51AQ86UW1 340 aa21■□□□□ 0.95
PDLIM2-217ENST00000491330 AIDAQ96BJ3 306 aa21■□□□□ 0.95
PDLIM2-217ENST00000491330 PLA2G12BQ9BX93 195 aa21■□□□□ 0.95
PDLIM2-217ENST00000491330 C9orf78Q9NZ63 289 aaPredicted RBP21■□□□□ 0.95
PDLIM2-217ENST00000491330 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 ANKRD18BA2A2Z9 1011 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 PSMD14O00487 310 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 KCNJ4P48050 445 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 PAXIP1Q6ZW49 1069 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 CDC37L1Q7L3B6 337 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 PODNQ7Z5L7 613 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 MICALL2Q8IY33 904 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 GREM2Q9H772 168 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 CHMP3Q9Y3E7 222 aa20.99■□□□□ 0.95
PDLIM2-217ENST00000491330 ECE1P42892 770 aa20.98■□□□□ 0.95
PDLIM2-217ENST00000491330 TAF7LQ5H9L4 462 aa20.98■□□□□ 0.95
PDLIM2-217ENST00000491330 LEMD3Q9Y2U8 911 aa20.98■□□□□ 0.95
PDLIM2-217ENST00000491330 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 ITGA6P23229 1130 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 IFIT5Q13325 482 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 SLC4A10Q6U841 1118 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 DCPSQ96C86 337 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 SRCIN1Q9C0H9 1055 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 MINPP1Q9UNW1 487 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
PDLIM2-217ENST00000491330 COL4A5P29400 1685 aa20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 DDX60Q8IY21 1712 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 LAMB2P55268 1798 aa20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 ALDH1L1O75891 902 aa20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 AGBL3Q8NEM8 1001 aa20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-217ENST00000491330 HSPA1AP0DMV8 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 HSPA1BP0DMV9 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 CCT4P50991 539 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 BEGAINQ9BUH8 593 aa20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 ZNF521Q96K83 1311 aa20.95■□□□□ 0.94
PDLIM2-217ENST00000491330 USP17L3A6NCW0 530 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 USP17L4A6NCW7 530 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 CSF1RP07333 972 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 VIL1P09327 827 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 BEND3Q5T5X7 828 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 RBM26Q5T8P6 1007 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 USP17L1Q7RTZ2 530 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 OGFOD1Q8N543 542 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 PGAP2Q9UHJ9 254 aa20.94■□□□□ 0.94
PDLIM2-217ENST00000491330 RASSF10A6NK89 507 aa20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 F6X3S4 739 aa20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 GRM8O00222 908 aa20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 MMP14P50281 582 aa20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 COA1Q9GZY4 146 aa20.93■□□□□ 0.94
PDLIM2-217ENST00000491330 CELF2O95319 508 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 TBC1D10BQ4KMP7 808 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 RSBN1LQ6PCB5 846 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 FBXW7Q969H0 707 aa20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 GPR101Q96P66 508 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 ZNF408Q9H9D4 720 aa20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 MED23Q9ULK4 1368 aa20.92■□□□□ 0.94
PDLIM2-217ENST00000491330 ZNF804BA4D1E1 1349 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 LRRC37AA6NMS7 1700 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 PTPRCP08575 1304 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 VEGFBP49765 207 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 FAM161AQ3B820 660 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 SULF1Q8IWU6 871 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 MYO3BQ8WXR4 1341 aa20.91■□□□□ 0.94
PDLIM2-217ENST00000491330 USP17L8P0C7I0 530 aa20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 KIF4BQ2VIQ3 1234 aa20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 SAMD7Q7Z3H4 446 aa20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 KRT26Q7Z3Y9 468 aa20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 TRPM4Q8TD43 1214 aa20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 GLIS2Q9BZE0 524 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-217ENST00000491330 WDR33Q9C0J8 1336 aaKnown RBP20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 TRAF5O00463 557 aa20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 CASP7P55210 303 aa20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 LMBR1LQ6UX01 489 aa20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 CEP350Q5VT06 3117 aa20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 DUOX1Q9NRD9 1551 aa20.89■□□□□ 0.93
PDLIM2-217ENST00000491330 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 HIRAP54198 1017 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 GRM1Q13255 1194 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 LDHAL6AQ6ZMR3 332 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 USP48Q86UV5 1035 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 C2orf69Q8N8R5 385 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 KCNQ5Q9NR82 932 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 CNNM1Q9NRU3 951 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 HDAC9Q9UKV0 1011 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 HDAC5Q9UQL6 1122 aa20.88■□□□□ 0.93
PDLIM2-217ENST00000491330 TLL2Q9Y6L7 1015 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms