RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
HPS4-215ENST00000491142 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
HPS4-215ENST00000491142 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
HPS4-215ENST00000491142 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
HPS4-215ENST00000491142 TRPA1O75762 1119 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 EGFRP00533 1210 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 PDIA6Q15084 440 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
HPS4-215ENST00000491142 RGMBQ6NW40 437 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
HPS4-215ENST00000491142 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
HPS4-215ENST00000491142 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
HPS4-215ENST00000491142 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 PSMD14O00487 310 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 ANXA1P04083 346 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 EIF2S2P20042 333 aaKnown RBP11.06□□□□□ -0.64
HPS4-215ENST00000491142 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
HPS4-215ENST00000491142 PROSER3Q2NL68 480 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 KRT26Q7Z3Y9 468 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 ZNF428Q96B54 188 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
HPS4-215ENST00000491142 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
HPS4-215ENST00000491142 SLFN5Q08AF3 891 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 GRAPQ13588 217 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
HPS4-215ENST00000491142 PDE4DIPQ5VU43 2346 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
HPS4-215ENST00000491142 NLRP10Q86W26 655 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 C2orf69Q8N8R5 385 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
HPS4-215ENST00000491142 DPF2Q92785 391 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 CCDC102AQ96A19 550 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 CSRNP1Q96S65 589 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 KCNQ5Q9NR82 932 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
HPS4-215ENST00000491142 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
HPS4-215ENST00000491142 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
HPS4-215ENST00000491142 DCPSQ96C86 337 aaKnown RBP11.04□□□□□ -0.64
HPS4-215ENST00000491142 PLEKHF1Q96S99 279 aa11.04□□□□□ -0.64
HPS4-215ENST00000491142 DBNDD1Q9H9R9 158 aa11.04□□□□□ -0.64
HPS4-215ENST00000491142 TRMT112Q9UI30 125 aaKnown RBP11.04□□□□□ -0.64
HPS4-215ENST00000491142 DUOX1Q9NRD9 1551 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 APAF1O14727 1248 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 NEFMP07197 916 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 CLCN6P51797 869 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
HPS4-215ENST00000491142 NFE2L2Q16236 605 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 TSPYL4Q9UJ04 414 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
HPS4-215ENST00000491142 LAMB2P55268 1798 aa11.03□□□□□ -0.64
HPS4-215ENST00000491142 TAF1P21675 1872 aa11.02□□□□□ -0.64
HPS4-215ENST00000491142 DLG5Q8TDM6 1919 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 E9PSI1 815 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 SLC10A3P09131 477 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
HPS4-215ENST00000491142 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
HPS4-215ENST00000491142 CCDC146Q8IYE0 955 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 NECTIN2Q92692 538 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
HPS4-215ENST00000491142 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 POLLQ9UGP5 575 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
HPS4-215ENST00000491142 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 RTL9Q8NET4 1388 aa11.02□□□□□ -0.65
HPS4-215ENST00000491142 POLR2AP24928 1970 aaKnown RBP11.01□□□□□ -0.65
HPS4-215ENST00000491142 ANKRD36CQ5JPF3 1778 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 C6orf229H3BNL8 230 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 ECE2O60344 883 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
HPS4-215ENST00000491142 GPSM2P81274 684 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 HSP90AB3PQ58FF7 597 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 TMC4Q7Z404 712 aa11.01□□□□□ -0.65
HPS4-215ENST00000491142 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
HPS4-215ENST00000491142 SULF1Q8IWU6 871 aa11□□□□□ -0.65
HPS4-215ENST00000491142 CDCA5Q96FF9 252 aa11□□□□□ -0.65
HPS4-215ENST00000491142 PHF12Q96QT6 1004 aa11□□□□□ -0.65
HPS4-215ENST00000491142 GGA3Q9NZ52 723 aa11□□□□□ -0.65
HPS4-215ENST00000491142 HPS5Q9UPZ3 1129 aa11□□□□□ -0.65
HPS4-215ENST00000491142 RBM19Q9Y4C8 960 aaKnown RBP11□□□□□ -0.65
HPS4-215ENST00000491142 MKI67P46013 3256 aaKnown RBP11□□□□□ -0.65
HPS4-215ENST00000491142 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
HPS4-215ENST00000491142 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
HPS4-215ENST00000491142 EXOC6Q8TAG9 804 aa10.99□□□□□ -0.65
HPS4-215ENST00000491142 FAM89AQ96GI7 184 aa10.99□□□□□ -0.65
HPS4-215ENST00000491142 COL4A1P02462 1669 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 VIL1P09327 827 aaKnown RBP10.98□□□□□ -0.65
HPS4-215ENST00000491142 SCARF1Q14162 830 aa10.98□□□□□ -0.65
HPS4-215ENST00000491142 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms