RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
SMPD4-219ENST00000491128 ZNF609O15014 1411 aa16.91■□□□□ 0.3
SMPD4-219ENST00000491128 PLSCR1O15162 318 aa16.91■□□□□ 0.3
SMPD4-219ENST00000491128 PDE8BO95263 885 aa16.91■□□□□ 0.3
SMPD4-219ENST00000491128 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-219ENST00000491128 VGLL2Q8N8G2 317 aa16.91■□□□□ 0.3
SMPD4-219ENST00000491128 CD2BP2O95400 341 aaKnown RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
SMPD4-219ENST00000491128 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 IFIT1P09914 478 aaKnown RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
SMPD4-219ENST00000491128 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
SMPD4-219ENST00000491128 SEC62Q99442 399 aaKnown RBP16.9■□□□□ 0.3
SMPD4-219ENST00000491128 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
SMPD4-219ENST00000491128 A0A0D9SFI3 127 aa16.89■□□□□ 0.3
SMPD4-219ENST00000491128 SSFA2P28290 1259 aa16.89■□□□□ 0.3
SMPD4-219ENST00000491128 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.3
SMPD4-219ENST00000491128 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.3
SMPD4-219ENST00000491128 NYXQ9GZU5 481 aa16.89■□□□□ 0.3
SMPD4-219ENST00000491128 BCORQ6W2J9 1755 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 REC8O95072 547 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 CHRNDQ07001 517 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 CNBD1Q8NA66 436 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 GPR108Q9NPR9 543 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-219ENST00000491128 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
SMPD4-219ENST00000491128 SGSM2O43147 1006 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 DDR1Q08345 913 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 HAUS7Q99871 368 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 ANO8Q9HCE9 1232 aaPredicted RBP16.88■□□□□ 0.29
SMPD4-219ENST00000491128 SERPINB2P05120 415 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 PHKA1P46020 1223 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 PTH1RQ03431 593 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 TAF1P21675 1872 aa16.88■□□□□ 0.29
SMPD4-219ENST00000491128 ADRA2BP18089 450 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
SMPD4-219ENST00000491128 CCDC158Q5M9N0 1113 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 ZAP70P43403 619 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 ZNF589Q86UQ0 364 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-219ENST00000491128 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
SMPD4-219ENST00000491128 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
SMPD4-219ENST00000491128 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 PDGFDQ9GZP0 370 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-219ENST00000491128 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 SCN7AQ01118 1682 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 C4AP0C0L4 1744 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 BCAMP50895 628 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
SMPD4-219ENST00000491128 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
SMPD4-219ENST00000491128 MCAMP43121 646 aa16.85■□□□□ 0.29
SMPD4-219ENST00000491128 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
SMPD4-219ENST00000491128 SLKQ9H2G2 1235 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-219ENST00000491128 TM4SF1P30408 202 aa16.85■□□□□ 0.29
SMPD4-219ENST00000491128 PUM3Q15397 648 aaKnown RBP16.85■□□□□ 0.29
SMPD4-219ENST00000491128 MROH5Q6ZUA9 1318 aa16.85■□□□□ 0.29
SMPD4-219ENST00000491128 MYH3P11055 1940 aa16.85■□□□□ 0.29
SMPD4-219ENST00000491128 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
SMPD4-219ENST00000491128 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
SMPD4-219ENST00000491128 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
SMPD4-219ENST00000491128 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
SMPD4-219ENST00000491128 KLRK1P26718 216 aa16.84■□□□□ 0.29
SMPD4-219ENST00000491128 RPS8P62241 208 aaKnown RBP16.84■□□□□ 0.29
SMPD4-219ENST00000491128 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
SMPD4-219ENST00000491128 FGFR2P21802 821 aa16.84■□□□□ 0.29
SMPD4-219ENST00000491128 LPIN2Q92539 896 aa16.84■□□□□ 0.29
SMPD4-219ENST00000491128 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.29
SMPD4-219ENST00000491128 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.29
SMPD4-219ENST00000491128 GYG1P46976 350 aa16.83■□□□□ 0.28
SMPD4-219ENST00000491128 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
SMPD4-219ENST00000491128 NOL8Q76FK4 1167 aaKnown RBP16.83■□□□□ 0.28
SMPD4-219ENST00000491128 KBTBD3Q8NAB2 608 aa16.83■□□□□ 0.28
SMPD4-219ENST00000491128 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
SMPD4-219ENST00000491128 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
SMPD4-219ENST00000491128 GPR101Q96P66 508 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-219ENST00000491128 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
SMPD4-219ENST00000491128 BSDC1Q9NW68 430 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-219ENST00000491128 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-219ENST00000491128 MMP10P09238 476 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 SLC5A1P13866 664 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 BECN1Q14457 450 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 RGL2O15211 777 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 CPA1P15085 419 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 COL9A3Q14050 684 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-219ENST00000491128 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
SMPD4-219ENST00000491128 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 JAG2Q9Y219 1238 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
SMPD4-219ENST00000491128 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
SMPD4-219ENST00000491128 RASGRF1Q13972 1273 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms