RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 IGF2-ASQ6U949 168 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 TXNRD3Q86VQ6 643 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 ATCAYQ86WG3 371 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 FBXO11Q86XK2 927 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 FMR1NBQ8N0W7 255 aaPredicted RBP3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 CCDC82Q8N4S0 544 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 TMC1Q8TDI8 760 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 WFDC12Q8WWY7 111 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 EDEM1Q92611 657 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 LENG1Q96BZ8 264 aaPredicted RBP3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 C11orf16Q9NQ32 467 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 SEPT3Q9UH03 358 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 ZMIZ1Q9ULJ6 1067 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 ALX3O95076 343 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 SELPP16109 830 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 CDC27P30260 824 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 ARL4DP49703 201 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 DTWD1Q8N5C7 304 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 DCAF11Q8TEB1 546 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 SLC7A3Q8WY07 619 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 NUDT16Q96DE0 195 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 LPIN3Q9BQK8 851 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 MUC3BQ9H195 1237 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 AKTIPQ9H8T0 292 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 ELP3Q9H9T3 547 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 ABI2Q9NYB9 513 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 FRRS1LQ9P0K9 344 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 NAGPAQ9UK23 515 aa3.33□□□□□ -1.88
SNRNP40-207ENST00000491106 ZBTB39O15060 712 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 OCLNQ16625 522 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 DUOXA2Q1HG44 320 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 PRSS36Q5K4E3 855 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 ALKBH2Q6NS38 261 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 ASAP3Q8TDY4 903 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 GTF3C2Q8WUA4 911 aaPredicted RBP3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 CLP1Q92989 425 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 PMEPA1Q969W9 287 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 COL26A1Q96A83 441 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 CARD10Q9BWT7 1032 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 MRPL18Q9H0U6 180 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 ANO2Q9NQ90 1003 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 SH2B1Q9NRF2 756 aaPredicted RBP3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 KANSL3Q9P2N6 904 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 TRIM33Q9UPN9 1127 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 KCNMB2Q9Y691 235 aa3.32□□□□□ -1.88
SNRNP40-207ENST00000491106 SUPT5HO00267 1087 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 PPP1R15AO75807 674 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 EGFRP00533 1210 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 PTPRAP18433 802 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 RXRBP28702 533 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 CD68P34810 354 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 ATP11AP98196 1134 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 FAM69CQ0P6D2 419 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 MTMR3Q13615 1198 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 COL9A3Q14050 684 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 ADGRE1Q14246 886 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 MBTPS1Q14703 1052 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 CACTIN-AS1Q8N1I8 211 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 OR13H1Q8NG92 308 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 RASSF4Q9H2L5 321 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 KCNF1Q9H3M0 494 aa3.31□□□□□ -1.88
SNRNP40-207ENST00000491106 CARNS1A5YM72 827 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 A6NHS1 94 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 DYRK3O43781 588 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 PHACTR2O75167 634 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 TRPA1O75762 1119 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 FAM13AO94988 1023 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 CYP2E1P05181 493 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 MPSTP25325 297 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 GRNP28799 593 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 RSPO4Q2I0M5 234 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 PDE12Q6L8Q7 609 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 ACAD11Q709F0 780 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 MAP4K3Q8IVH8 894 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 AGGF1Q8N302 714 aaeCLIP3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 Q8N3U1 123 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 TTC9Q92623 222 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 MDFIQ99750 246 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 PBX4Q9BYU1 374 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 TMEM63CQ9P1W3 806 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 STOML1Q9UBI4 398 aa3.3□□□□□ -1.88
SNRNP40-207ENST00000491106 PDE2AO00408 941 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 TNFRSF10BO14763 440 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 FSCN2O14926 492 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 MZF1P28698 734 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 NOS3P29474 1203 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 SOX18P35713 384 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 USP5P45974 858 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 EIF1AXP47813 144 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 NLRP12P59046 1061 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 SRPK2P78362 688 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 FKBP4Q02790 459 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 TRIP4Q15650 581 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 FAM26DQ5JW98 314 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 COL13A1Q5TAT6 717 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 B4GALNT3Q6L9W6 998 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 C1orf127Q8N9H9 656 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 C12orf50Q8NA57 414 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 HELQQ8TDG4 1101 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 CEP41Q9BYV8 373 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms