RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 EVI5LQ96CN4 794 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CLGNO14967 610 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 CIAO1O76071 339 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 PTMSP20962 102 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 MYH3P11055 1940 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 NTSR2O95665 410 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
HDAC9-225ENST00000490851 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
HDAC9-225ENST00000490851 ZPR1O75312 459 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 ATP5JP18859 108 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 ADORA1P30542 326 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-225ENST00000490851 GORABQ5T7V8 394 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 DDX46Q7L014 1031 aaKnown RBP12.18□□□□□ -0.46
HDAC9-225ENST00000490851 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 SEC31BQ9NQW1 1179 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 ZNF609O15014 1411 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 SGSM2O43147 1006 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 HELBQ8NG08 1087 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-225ENST00000490851 AK7Q96M32 723 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
HDAC9-225ENST00000490851 CHGBP05060 677 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 NMIQ13287 307 aaPredicted RBP12.17□□□□□ -0.46
HDAC9-225ENST00000490851 ERFEQ4G0M1 354 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 MMP14P50281 582 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
HDAC9-225ENST00000490851 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
HDAC9-225ENST00000490851 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
HDAC9-225ENST00000490851 BCORQ6W2J9 1755 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 GOLIM4O00461 696 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 FAM193AP78312 1265 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 SNRKQ9NRH2 765 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 NARFQ9UHQ1 456 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 A0A0D9SFI3 127 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 RABEP1Q15276 862 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 XAGE2Q96GT9 111 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 GPR108Q9NPR9 543 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 RIPOR2Q9Y4F9 1068 aa12.16□□□□□ -0.46
HDAC9-225ENST00000490851 IFIT1P09914 478 aaKnown RBP12.15□□□□□ -0.46
HDAC9-225ENST00000490851 RFC4P35249 363 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 LY75O60449 1722 aa12.15□□□□□ -0.46
HDAC9-225ENST00000490851 SNAP23O00161 211 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 NPHP1O15259 732 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.47
HDAC9-225ENST00000490851 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.47
HDAC9-225ENST00000490851 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.47
HDAC9-225ENST00000490851 PTH1RQ03431 593 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.47
HDAC9-225ENST00000490851 SETDB2Q96T68 719 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 MPHOSPH8Q99549 860 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 HAUS7Q99871 368 aa12.15□□□□□ -0.47
HDAC9-225ENST00000490851 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.47
HDAC9-225ENST00000490851 TAF1LQ8IZX4 1826 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
HDAC9-225ENST00000490851 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 TRAPPC3LQ5T215 181 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
HDAC9-225ENST00000490851 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
HDAC9-225ENST00000490851 SNX21Q969T3 373 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 RAD50Q92878 1312 aa12.14□□□□□ -0.47
HDAC9-225ENST00000490851 TAF5LO75529 589 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
HDAC9-225ENST00000490851 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
HDAC9-225ENST00000490851 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
HDAC9-225ENST00000490851 HIP1O00291 1037 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 KCNJ4P48050 445 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 NEK4P51957 841 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
HDAC9-225ENST00000490851 SCARF1Q14162 830 aa12.12□□□□□ -0.47
HDAC9-225ENST00000490851 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
HDAC9-225ENST00000490851 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms