RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 TSR2Q969E8 191 aaKnown RBP9.7□□□□□ -0.86
CLDN1-202ENST00000490800 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 TAOK3Q9H2K8 898 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 IFT57Q9NWB7 429 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 SBF1O95248 1867 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 ANKRD31Q8N7Z5 1873 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 ANXA1P04083 346 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 GNAI1P63096 354 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 SUSD4Q5VX71 490 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
CLDN1-202ENST00000490800 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
CLDN1-202ENST00000490800 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 CHL1O00533 1208 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 DDNO94850 711 aaPredicted RBP9.68□□□□□ -0.86
CLDN1-202ENST00000490800 NEFLP07196 543 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 RRP1P56182 461 aaKnown RBP9.68□□□□□ -0.86
CLDN1-202ENST00000490800 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
CLDN1-202ENST00000490800 LRP10Q7Z4F1 713 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 SMC1BQ8NDV3 1235 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
CLDN1-202ENST00000490800 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
CLDN1-202ENST00000490800 UBN2Q6ZU65 1347 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 SNPHO15079 494 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 IRX6P78412 446 aaPredicted RBP9.67□□□□□ -0.86
CLDN1-202ENST00000490800 EXOSC9Q06265 439 aaKnown RBP9.67□□□□□ -0.86
CLDN1-202ENST00000490800 AIMP1Q12904 312 aaKnown RBP9.67□□□□□ -0.86
CLDN1-202ENST00000490800 KRT24Q2M2I5 525 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 ZNF277Q9NRM2 450 aaPredicted RBP9.67□□□□□ -0.86
CLDN1-202ENST00000490800 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 SLX4Q8IY92 1834 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 BCORQ6W2J9 1755 aa9.67□□□□□ -0.86
CLDN1-202ENST00000490800 KDM3BQ7LBC6 1761 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 COL11A2P13942 1736 aaPredicted RBP9.66□□□□□ -0.86
CLDN1-202ENST00000490800 CT47B1P0C2W7 299 aaPredicted RBP9.66□□□□□ -0.86
CLDN1-202ENST00000490800 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLDN1-202ENST00000490800 CRY2Q49AN0 593 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 XAGE3Q8WTP9 111 aa9.66□□□□□ -0.86
CLDN1-202ENST00000490800 ABCC12Q96J65 1359 aa9.65□□□□□ -0.86
CLDN1-202ENST00000490800 TCERG1O14776 1098 aaKnown RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 NTSR2O95665 410 aa9.65□□□□□ -0.86
CLDN1-202ENST00000490800 HOXA10P31260 410 aaPredicted RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 TTLL12Q14166 644 aaPredicted RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 PARP10Q53GL7 1025 aa9.65□□□□□ -0.86
CLDN1-202ENST00000490800 SLC10A5Q5PT55 438 aa9.65□□□□□ -0.86
CLDN1-202ENST00000490800 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 RBM17Q96I25 401 aaKnown RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 NLRP3Q96P20 1036 aa9.65□□□□□ -0.86
CLDN1-202ENST00000490800 UTP14AQ9BVJ6 771 aaKnown RBP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLDN1-202ENST00000490800 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 PLIN1O60240 522 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 BCAR3O75815 825 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
CLDN1-202ENST00000490800 PPP4R3BQ5MIZ7 849 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 FER1L6Q2WGJ9 1857 aa9.64□□□□□ -0.87
CLDN1-202ENST00000490800 POTEMA6NI47 508 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 VAMP4O75379 141 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 AMHR2Q16671 573 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 SLC51AQ86UW1 340 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 NLRP10Q86W26 655 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 TSPYL6Q8N831 410 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 C8orf58Q8NAV2 365 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 CRAMP1Q96RY5 1269 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 CHPF2Q9P2E5 772 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
CLDN1-202ENST00000490800 ZNF541Q9H0D2 1346 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 TNRC6CQ9HCJ0 1690 aaKnown RBP9.62□□□□□ -0.87
CLDN1-202ENST00000490800 FZD9O00144 591 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
CLDN1-202ENST00000490800 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 HDGFL1Q5TGJ6 251 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 ERICH6BQ5W0A0 696 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 PARP9Q8IXQ6 854 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 SSH1Q8WYL5 1049 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms