RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 SLC4A2P04920 1241 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 IGKV5-2P06315 115 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 GRM1Q13255 1194 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 DCAF8Q5TAQ9 597 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 G2E3Q7L622 706 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 TRPM4Q8TD43 1214 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 FOXN1O15353 648 aa26.9■■□□□ 1.9
SYNE4-205ENST00000490730 CAPN15O75808 1086 aa26.9■■□□□ 1.9
SYNE4-205ENST00000490730 CWF19L2Q2TBE0 894 aaKnown RBP26.9■■□□□ 1.9
SYNE4-205ENST00000490730 GLIS2Q9BZE0 524 aaPredicted RBP26.9■■□□□ 1.9
SYNE4-205ENST00000490730 ZC3H12CQ9C0D7 883 aaKnown RBP26.9■■□□□ 1.9
SYNE4-205ENST00000490730 WDR33Q9C0J8 1336 aaKnown RBP26.9■■□□□ 1.9
SYNE4-205ENST00000490730 MYH3P11055 1940 aa26.89■■□□□ 1.9
SYNE4-205ENST00000490730 HIRAP54198 1017 aaPredicted RBP26.89■■□□□ 1.9
SYNE4-205ENST00000490730 ANKRD18AQ8IVF6 992 aa26.89■■□□□ 1.9
SYNE4-205ENST00000490730 GGA1Q9UJY5 639 aa26.89■■□□□ 1.9
SYNE4-205ENST00000490730 FANCIQ9NVI1 1328 aa26.89■■□□□ 1.89
SYNE4-205ENST00000490730 SPEF2Q9C093 1822 aa26.88■■□□□ 1.89
SYNE4-205ENST00000490730 CTSWP56202 376 aa26.88■■□□□ 1.89
SYNE4-205ENST00000490730 CST9Q5W186 159 aa26.88■■□□□ 1.89
SYNE4-205ENST00000490730 KCNQ5Q9NR82 932 aa26.88■■□□□ 1.89
SYNE4-205ENST00000490730 PODXL2Q9NZ53 605 aa26.88■■□□□ 1.89
SYNE4-205ENST00000490730 ZNF408Q9H9D4 720 aa26.87■■□□□ 1.89
SYNE4-205ENST00000490730 RTL9Q8NET4 1388 aa26.86■■□□□ 1.89
SYNE4-205ENST00000490730 CELF2O95319 508 aaKnown RBP26.86■■□□□ 1.89
SYNE4-205ENST00000490730 SAMD7Q7Z3H4 446 aa26.86■■□□□ 1.89
SYNE4-205ENST00000490730 ZC3H15Q8WU90 426 aaKnown RBP26.86■■□□□ 1.89
SYNE4-205ENST00000490730 DPF2Q92785 391 aa26.86■■□□□ 1.89
SYNE4-205ENST00000490730 NEURL1BA8MQ27 555 aa26.85■■□□□ 1.89
SYNE4-205ENST00000490730 TBC1D10BQ4KMP7 808 aaPredicted RBP26.85■■□□□ 1.89
SYNE4-205ENST00000490730 NCBP3Q53F19 620 aaKnown RBP26.85■■□□□ 1.89
SYNE4-205ENST00000490730 UBE3BQ7Z3V4 1068 aa26.85■■□□□ 1.89
SYNE4-205ENST00000490730 CAPNS2Q96L46 248 aa26.85■■□□□ 1.89
SYNE4-205ENST00000490730 CDC5LQ99459 802 aaKnown RBP26.85■■□□□ 1.89
SYNE4-205ENST00000490730 PGAP2Q9UHJ9 254 aa26.85■■□□□ 1.89
SYNE4-205ENST00000490730 SCN9AQ15858 1988 aa26.85■■□□□ 1.89
SYNE4-205ENST00000490730 RPS12P25398 132 aaKnown RBP26.84■■□□□ 1.89
SYNE4-205ENST00000490730 FLIIQ13045 1269 aa26.84■■□□□ 1.89
SYNE4-205ENST00000490730 FKBP5Q13451 457 aaPredicted RBP26.84■■□□□ 1.89
SYNE4-205ENST00000490730 RBM26Q5T8P6 1007 aaKnown RBP26.84■■□□□ 1.89
SYNE4-205ENST00000490730 CYP4F22Q6NT55 531 aa26.84■■□□□ 1.89
SYNE4-205ENST00000490730 WBP1LQ9NX94 342 aa26.84■■□□□ 1.89
SYNE4-205ENST00000490730 TLL2Q9Y6L7 1015 aa26.84■■□□□ 1.89
SYNE4-205ENST00000490730 XDHP47989 1333 aa26.84■■□□□ 1.89
SYNE4-205ENST00000490730 ECE1P42892 770 aa26.83■■□□□ 1.89
SYNE4-205ENST00000490730 CTCFP49711 727 aaPredicted RBP26.83■■□□□ 1.89
SYNE4-205ENST00000490730 CDC37L1Q7L3B6 337 aa26.83■■□□□ 1.89
SYNE4-205ENST00000490730 TTLL11Q8NHH1 800 aa26.83■■□□□ 1.89
SYNE4-205ENST00000490730 GREM2Q9H772 168 aa26.83■■□□□ 1.89
SYNE4-205ENST00000490730 WDR63Q8IWG1 891 aa26.82■■□□□ 1.88
SYNE4-205ENST00000490730 MAP2K1Q02750 393 aaPredicted RBP26.81■■□□□ 1.88
SYNE4-205ENST00000490730 EXOSC9Q06265 439 aaKnown RBP26.81■■□□□ 1.88
SYNE4-205ENST00000490730 USP48Q86UV5 1035 aa26.81■■□□□ 1.88
SYNE4-205ENST00000490730 FAM9BQ8IZU0 186 aa26.81■■□□□ 1.88
SYNE4-205ENST00000490730 CACNA1FO60840 1977 aa26.8■■□□□ 1.88
SYNE4-205ENST00000490730 EGFRP00533 1210 aa26.8■■□□□ 1.88
SYNE4-205ENST00000490730 ATP2B4P23634 1241 aa26.79■■□□□ 1.88
SYNE4-205ENST00000490730 GCKRQ14397 625 aa26.79■■□□□ 1.88
SYNE4-205ENST00000490730 DNAAF4Q8WXU2 420 aa26.79■■□□□ 1.88
SYNE4-205ENST00000490730 THSD7BQ9C0I4 1608 aa26.79■■□□□ 1.88
SYNE4-205ENST00000490730 H7C1W4 665 aa26.78■■□□□ 1.88
SYNE4-205ENST00000490730 VAMP4O75379 141 aa26.78■■□□□ 1.88
SYNE4-205ENST00000490730 VIL1P09327 827 aaKnown RBP26.78■■□□□ 1.88
SYNE4-205ENST00000490730 LBX1P52954 281 aa26.78■■□□□ 1.88
SYNE4-205ENST00000490730 SAPCD2Q86UD0 394 aa26.78■■□□□ 1.88
SYNE4-205ENST00000490730 MYH16Q9H6N6 1097 aa26.78■■□□□ 1.88
SYNE4-205ENST00000490730 KIF4BQ2VIQ3 1234 aa26.77■■□□□ 1.88
SYNE4-205ENST00000490730 DLK2Q6UY11 383 aa26.77■■□□□ 1.88
SYNE4-205ENST00000490730 KRT26Q7Z3Y9 468 aa26.77■■□□□ 1.88
SYNE4-205ENST00000490730 PRDM10Q9NQV6 1147 aa26.77■■□□□ 1.88
SYNE4-205ENST00000490730 BSDC1Q9NW68 430 aaPredicted RBP26.77■■□□□ 1.88
SYNE4-205ENST00000490730 PSME4Q14997 1843 aa26.76■■□□□ 1.88
SYNE4-205ENST00000490730 AOC2O75106 756 aa26.76■■□□□ 1.87
SYNE4-205ENST00000490730 IGHMBP2P38935 993 aaKnown RBP26.76■■□□□ 1.87
SYNE4-205ENST00000490730 DCPSQ96C86 337 aaKnown RBP26.76■■□□□ 1.87
SYNE4-205ENST00000490730 BEGAINQ9BUH8 593 aa26.76■■□□□ 1.87
SYNE4-205ENST00000490730 MINPP1Q9UNW1 487 aa26.76■■□□□ 1.87
SYNE4-205ENST00000490730 POLR2AP24928 1970 aaKnown RBP26.76■■□□□ 1.87
SYNE4-205ENST00000490730 WTIPA6NIX2 430 aaPredicted RBP26.75■■□□□ 1.87
SYNE4-205ENST00000490730 LINS1Q8NG48 757 aa26.75■■□□□ 1.87
SYNE4-205ENST00000490730 ADM5C9JUS6 153 aa26.74■■□□□ 1.87
SYNE4-205ENST00000490730 FAM161AQ3B820 660 aa26.74■■□□□ 1.87
SYNE4-205ENST00000490730 RSBN1LQ6PCB5 846 aaPredicted RBP26.74■■□□□ 1.87
SYNE4-205ENST00000490730 SPINK5Q9NQ38 1064 aaPredicted RBP26.74■■□□□ 1.87
SYNE4-205ENST00000490730 HSPA8P11142 646 aaKnown RBP26.73■■□□□ 1.87
SYNE4-205ENST00000490730 ITGA6P23229 1130 aa26.73■■□□□ 1.87
SYNE4-205ENST00000490730 GGA3Q9NZ52 723 aa26.73■■□□□ 1.87
SYNE4-205ENST00000490730 MED23Q9ULK4 1368 aa26.72■■□□□ 1.87
SYNE4-205ENST00000490730 CCT4P50991 539 aaKnown RBP26.72■■□□□ 1.87
SYNE4-205ENST00000490730 AGBL3Q8NEM8 1001 aa26.72■■□□□ 1.87
SYNE4-205ENST00000490730 FBXW7Q969H0 707 aa26.72■■□□□ 1.87
SYNE4-205ENST00000490730 MPHOSPH8Q99549 860 aa26.72■■□□□ 1.87
SYNE4-205ENST00000490730 PLA2G12BQ9BX93 195 aa26.72■■□□□ 1.87
SYNE4-205ENST00000490730 USP17L3A6NCW0 530 aa26.71■■□□□ 1.87
SYNE4-205ENST00000490730 USP17L4A6NCW7 530 aa26.71■■□□□ 1.87
SYNE4-205ENST00000490730 F6X3S4 739 aa26.71■■□□□ 1.87
SYNE4-205ENST00000490730 USP17L1Q7RTZ2 530 aa26.71■■□□□ 1.87
SYNE4-205ENST00000490730 PODNQ7Z5L7 613 aa26.71■■□□□ 1.87
SYNE4-205ENST00000490730 ASTN2O75129 1339 aaPredicted RBP26.7■■□□□ 1.87
SYNE4-205ENST00000490730 CASP7P55210 303 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms