RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 PHLDB1Q86UU1 1377 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 TNIKQ9UKE5 1360 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 AKNAQ7Z591 1439 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 EIF1AYO14602 144 aaKnown RBP7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 RPLP1P05386 114 aaKnown RBP7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 IER5Q5VY09 327 aa7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 ALG1LQ6GMV1 187 aa7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 TRIM46Q7Z4K8 759 aa7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 CEP63Q96MT8 703 aa7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 GPC6Q9Y625 555 aaPredicted RBP7.65□□□□□ -1.18
SSX2IP-208ENST00000490476 SOS2Q07890 1332 aaPredicted RBP7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 SORBS3O60504 671 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 IGSF3O75054 1194 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 NEFLP07196 543 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 INPP5BP32019 993 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 MRPL58Q14197 206 aaKnown RBP7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 ZNF438Q7Z4V0 828 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 PGBD3Q8N328 593 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 ZFP42Q96MM3 310 aa7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 GMPR2Q9P2T1 348 aaKnown RBP7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 FOXD3Q9UJU5 478 aaPredicted RBP7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 FNDC3AQ9Y2H6 1198 aaKnown RBP7.64□□□□□ -1.19
SSX2IP-208ENST00000490476 EFCAB5A4FU69 1503 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 ZFYVE16Q7Z3T8 1539 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 C11orf95C9JLR9 678 aaPredicted RBP7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 TRIP4Q15650 581 aaPredicted RBP7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 C9orf131Q5VYM1 1079 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
SSX2IP-208ENST00000490476 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 CPNE3O75131 537 aaKnown RBP7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 DAB2P98082 770 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 TMC4Q7Z404 712 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 SENP2Q9HC62 589 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 ATP13A2Q9NQ11 1180 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 DNMT3LQ9UJW3 386 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 NEO1Q92859 1461 aa7.62□□□□□ -1.19
SSX2IP-208ENST00000490476 ZNF142P52746 1687 aaPredicted RBP7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 TNFRSF21O75509 655 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 F11P03951 625 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 EPB42P16452 691 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 RIPOR1Q6ZS17 1223 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 CFHR5Q9BXR6 569 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 ZMYM4Q5VZL5 1548 aa7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
SSX2IP-208ENST00000490476 NHSL1Q5SYE7 1610 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 SOBPA7XYQ1 873 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 SCAMP3O14828 347 aaKnown RBP7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 MAN1A2O60476 641 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 PHACTR2O75167 634 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 XYLBO75191 536 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 POLR3DP05423 398 aaPredicted RBP7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 GNA15P30679 374 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 ITGAEP38570 1179 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 TYRO3Q06418 890 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 TMEM63CQ9P1W3 806 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 DYRK1BQ9Y463 629 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 PLA2R1Q13018 1463 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 CARMIL2Q6F5E8 1435 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 ABCA9Q8IUA7 1624 aa7.6□□□□□ -1.19
SSX2IP-208ENST00000490476 ERCC5P28715 1186 aaPredicted RBP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 IRS1P35568 1242 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 PDE12Q6L8Q7 609 aaKnown RBP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 SNX29Q8TEQ0 813 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 FBF1Q8TES7 1133 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 KIFC2Q96AC6 838 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 TRIM47Q96LD4 638 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 ZCCHC2Q9C0B9 1178 aaKnown RBP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 DNAJC25Q9H1X3 360 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 CRISPLD1Q9H336 500 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 TCOF1Q13428 1488 aaKnown RBP7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 SHANK2Q9UPX8 1470 aa7.59□□□□□ -1.19
SSX2IP-208ENST00000490476 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 HDLBPQ00341 1268 aaKnown RBP7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 KRT25Q7Z3Z0 450 aa7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 CCDC74AQ96AQ1 378 aa7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 NLRP2Q9NX02 1062 aa7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 SPG7Q9UQ90 795 aa7.58□□□□□ -1.2
SSX2IP-208ENST00000490476 LDLRAD1Q5T700 205 aa7.57□□□□□ -1.2
SSX2IP-208ENST00000490476 XKR5Q6UX68 686 aa7.57□□□□□ -1.2
SSX2IP-208ENST00000490476 ZFYVE28Q9HCC9 887 aa7.57□□□□□ -1.2
SSX2IP-208ENST00000490476 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
SSX2IP-208ENST00000490476 SYNMO15061 1565 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 TRAPPC8Q9Y2L5 1435 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 SASH3O75995 380 aa7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 EIF4BP23588 611 aaKnown RBP7.56□□□□□ -1.2
SSX2IP-208ENST00000490476 SFSWAPQ12872 951 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms