RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SUV39H2Q9H5I1 410 aa9.72□□□□□ -0.85
CCDC39-206ENST00000489868 GPR182O15218 404 aa9.71□□□□□ -0.86
CCDC39-206ENST00000489868 NDUFB5O43674 189 aa9.71□□□□□ -0.86
CCDC39-206ENST00000489868 GRIK5Q16478 980 aa9.71□□□□□ -0.86
CCDC39-206ENST00000489868 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
CCDC39-206ENST00000489868 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.86
CCDC39-206ENST00000489868 KIF4AO95239 1232 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 NID1P14543 1247 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 EIF2AK2P19525 551 aaKnown RBP9.7□□□□□ -0.86
CCDC39-206ENST00000489868 IRS1P35568 1242 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 AFF1P51825 1210 aaKnown RBP9.7□□□□□ -0.86
CCDC39-206ENST00000489868 PCSK7Q16549 785 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 BEND7Q8N7W2 519 aaPredicted RBP9.7□□□□□ -0.86
CCDC39-206ENST00000489868 TTC16Q8NEE8 873 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 SCARF2Q96GP6 870 aaPredicted RBP9.7□□□□□ -0.86
CCDC39-206ENST00000489868 SMG9Q9H0W8 520 aaKnown RBP9.7□□□□□ -0.86
CCDC39-206ENST00000489868 PRDM6Q9NQX0 595 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 MKL2Q9ULH7 1088 aa9.7□□□□□ -0.86
CCDC39-206ENST00000489868 EREGO14944 169 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 ACPPP15309 386 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 COL8A1P27658 744 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 ATP11AP98196 1134 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 EHHADHQ08426 723 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 ADAMTSL4Q6UY14 1074 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 RBCK1Q9BYM8 510 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 FRRS1LQ9P0K9 344 aa9.69□□□□□ -0.86
CCDC39-206ENST00000489868 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
CCDC39-206ENST00000489868 GNB5O14775 395 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 CES1P23141 567 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 ELMSAN1Q6PJG2 1045 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 TMC7Q7Z402 723 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 DCTN4Q9UJW0 460 aa9.68□□□□□ -0.86
CCDC39-206ENST00000489868 PHF20L1A8MW92 1017 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 LILRB5O75023 590 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 PHACTR2O75167 634 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 RGS9O75916 674 aaPredicted RBP9.67□□□□□ -0.86
CCDC39-206ENST00000489868 HYAL2Q12891 473 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 ORC1Q13415 861 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 CEP120Q8N960 986 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 PLD4Q96BZ4 506 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 CITED4Q96RK1 184 aa9.67□□□□□ -0.86
CCDC39-206ENST00000489868 MAPK1P28482 360 aa9.66□□□□□ -0.86
CCDC39-206ENST00000489868 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
CCDC39-206ENST00000489868 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
CCDC39-206ENST00000489868 ILDR2Q71H61 639 aa9.66□□□□□ -0.86
CCDC39-206ENST00000489868 RASSF4Q9H2L5 321 aa9.66□□□□□ -0.86
CCDC39-206ENST00000489868 GHRHP01286 108 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
CCDC39-206ENST00000489868 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC39-206ENST00000489868 NCAPG2Q86XI2 1143 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 PLVAPQ9BX97 442 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 LATS2Q9NRM7 1088 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 TRIM33Q9UPN9 1127 aa9.65□□□□□ -0.86
CCDC39-206ENST00000489868 TRPA1O75762 1119 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 TTC9Q92623 222 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
CCDC39-206ENST00000489868 NFKBIEO00221 500 aa9.63□□□□□ -0.87
CCDC39-206ENST00000489868 BAG6P46379 1132 aa9.63□□□□□ -0.87
CCDC39-206ENST00000489868 RASSF7Q02833 373 aa9.63□□□□□ -0.87
CCDC39-206ENST00000489868 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
CCDC39-206ENST00000489868 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
CCDC39-206ENST00000489868 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-206ENST00000489868 ALKBH8Q96BT7 664 aaKnown RBP9.62□□□□□ -0.87
CCDC39-206ENST00000489868 DSC3Q14574 896 aa9.61□□□□□ -0.87
CCDC39-206ENST00000489868 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
CCDC39-206ENST00000489868 DMRTB1Q96MA1 342 aa9.61□□□□□ -0.87
CCDC39-206ENST00000489868 PBX4Q9BYU1 374 aa9.61□□□□□ -0.87
CCDC39-206ENST00000489868 DZANK1Q9NVP4 752 aa9.61□□□□□ -0.87
CCDC39-206ENST00000489868 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
CCDC39-206ENST00000489868 TREHO43280 583 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 CEP135Q66GS9 1140 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 DMRTC2Q8IXT2 367 aaPredicted RBP9.6□□□□□ -0.87
CCDC39-206ENST00000489868 PMEPA1Q969W9 287 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 SPACA7Q96KW9 195 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 POP1Q99575 1024 aaKnown RBP9.6□□□□□ -0.87
CCDC39-206ENST00000489868 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
CCDC39-206ENST00000489868 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
CCDC39-206ENST00000489868 EIF1AYO14602 144 aaKnown RBP9.59□□□□□ -0.87
CCDC39-206ENST00000489868 DCAF5Q96JK2 942 aa9.59□□□□□ -0.87
CCDC39-206ENST00000489868 ASB16Q96NS5 453 aa9.59□□□□□ -0.87
CCDC39-206ENST00000489868 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
CCDC39-206ENST00000489868 OSMRQ99650 979 aa9.58□□□□□ -0.88
CCDC39-206ENST00000489868 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
CCDC39-206ENST00000489868 A0A0A0MRY4 1105 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 PIK3R2O00459 728 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 CPNE3O75131 537 aaKnown RBP9.57□□□□□ -0.88
CCDC39-206ENST00000489868 GDF11O95390 407 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 ITGB2P05107 769 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
CCDC39-206ENST00000489868 GALNT12Q8IXK2 581 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms