RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 TBC1D16Q8TBP0 767 aa14.9□□□□□ -0.02
GGPS1-207ENST00000489692 POLLQ9UGP5 575 aa14.9□□□□□ -0.02
GGPS1-207ENST00000489692 ABT1Q9ULW3 272 aaKnown RBP14.9□□□□□ -0.02
GGPS1-207ENST00000489692 H7C1D1 291 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 ECE2O60344 883 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 ITGBL1O95965 494 aaPredicted RBP14.89□□□□□ -0.03
GGPS1-207ENST00000489692 B4GALNT3Q6L9W6 998 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 PAXIP1Q6ZW49 1069 aaPredicted RBP14.89□□□□□ -0.03
GGPS1-207ENST00000489692 JMYQ8N9B5 988 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 PASKQ96RG2 1323 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 CDHR2Q9BYE9 1310 aa14.89□□□□□ -0.03
GGPS1-207ENST00000489692 YDJCA8MPS7 323 aa14.88□□□□□ -0.03
GGPS1-207ENST00000489692 E9PSI1 815 aa14.88□□□□□ -0.03
GGPS1-207ENST00000489692 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
GGPS1-207ENST00000489692 CNOT7Q9UIV1 285 aaKnown RBP14.88□□□□□ -0.03
GGPS1-207ENST00000489692 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
GGPS1-207ENST00000489692 DICER1Q9UPY3 1922 aaKnown RBP14.88□□□□□ -0.03
GGPS1-207ENST00000489692 PSMD14O00487 310 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
GGPS1-207ENST00000489692 GCKRQ14397 625 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 MICALL2Q8IY33 904 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 GREM2Q9H772 168 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 ANKRD36CQ5JPF3 1778 aa14.87□□□□□ -0.03
GGPS1-207ENST00000489692 F6X3S4 739 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 HSPA1AP0DMV8 641 aaKnown RBP14.86□□□□□ -0.03
GGPS1-207ENST00000489692 HSPA1BP0DMV9 641 aaKnown RBP14.86□□□□□ -0.03
GGPS1-207ENST00000489692 GRM1Q13255 1194 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
GGPS1-207ENST00000489692 LINS1Q8NG48 757 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 TTLL11Q8NHH1 800 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 XDHP47989 1333 aa14.86□□□□□ -0.03
GGPS1-207ENST00000489692 H7C1W4 665 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 TRAF5O00463 557 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 ATP2B4P23634 1241 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 FMR1Q06787 632 aaKnown RBP eCLIP14.85□□□□□ -0.03
GGPS1-207ENST00000489692 DEFB115Q30KQ5 88 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 SLC4A10Q6U841 1118 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 FBXW7Q969H0 707 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 ZNF408Q9H9D4 720 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
GGPS1-207ENST00000489692 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
GGPS1-207ENST00000489692 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
GGPS1-207ENST00000489692 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
GGPS1-207ENST00000489692 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
GGPS1-207ENST00000489692 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
GGPS1-207ENST00000489692 CNTNAP1P78357 1384 aa14.84□□□□□ -0.03
GGPS1-207ENST00000489692 ITGA6P23229 1130 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 KCNJ4P48050 445 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 VEGFBP49765 207 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 FAM161AQ3B820 660 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 SAMD7Q7Z3H4 446 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 GLIS2Q9BZE0 524 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-207ENST00000489692 BSDC1Q9NW68 430 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-207ENST00000489692 C9orf78Q9NZ63 289 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-207ENST00000489692 MINPP1Q9UNW1 487 aa14.83□□□□□ -0.04
GGPS1-207ENST00000489692 SCN4AP35499 1836 aa14.82□□□□□ -0.04
GGPS1-207ENST00000489692 CELF2O95319 508 aaKnown RBP14.82□□□□□ -0.04
GGPS1-207ENST00000489692 RPS12P25398 132 aaKnown RBP14.82□□□□□ -0.04
GGPS1-207ENST00000489692 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
GGPS1-207ENST00000489692 IFFO2Q5TF58 517 aa14.82□□□□□ -0.04
GGPS1-207ENST00000489692 DPF2Q92785 391 aa14.82□□□□□ -0.04
GGPS1-207ENST00000489692 ANKRD18BA2A2Z9 1011 aa14.81□□□□□ -0.04
GGPS1-207ENST00000489692 CCT4P50991 539 aaKnown RBP14.81□□□□□ -0.04
GGPS1-207ENST00000489692 HIRAP54198 1017 aaPredicted RBP14.81□□□□□ -0.04
GGPS1-207ENST00000489692 CDC37L1Q7L3B6 337 aa14.81□□□□□ -0.04
GGPS1-207ENST00000489692 EXOC6Q8TAG9 804 aa14.81□□□□□ -0.04
GGPS1-207ENST00000489692 ZC3H15Q8WU90 426 aaKnown RBP14.81□□□□□ -0.04
GGPS1-207ENST00000489692 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
GGPS1-207ENST00000489692 IFIT5Q13325 482 aaKnown RBP14.8□□□□□ -0.04
GGPS1-207ENST00000489692 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 USP48Q86UV5 1035 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 DCPSQ96C86 337 aaKnown RBP14.8□□□□□ -0.04
GGPS1-207ENST00000489692 PLA2G12BQ9BX93 195 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 ANKRD2Q9GZV1 360 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
GGPS1-207ENST00000489692 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 LAMB2P55268 1798 aa14.8□□□□□ -0.04
GGPS1-207ENST00000489692 USP17L3A6NCW0 530 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 USP17L4A6NCW7 530 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 RASSF10A6NK89 507 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 COL4A1P02462 1669 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 VIL1P09327 827 aaKnown RBP14.79□□□□□ -0.04
GGPS1-207ENST00000489692 ECE1P42892 770 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 CASP7P55210 303 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 COL13A1Q5TAT6 717 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-207ENST00000489692 USP17L1Q7RTZ2 530 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 KRT26Q7Z3Y9 468 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 SRCIN1Q9C0H9 1055 aa14.79□□□□□ -0.04
GGPS1-207ENST00000489692 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
GGPS1-207ENST00000489692 WTIPA6NIX2 430 aaPredicted RBP14.78□□□□□ -0.04
GGPS1-207ENST00000489692 GRM8O00222 908 aa14.78□□□□□ -0.04
GGPS1-207ENST00000489692 CCDC57Q2TAC2 916 aa14.78□□□□□ -0.04
GGPS1-207ENST00000489692 RSBN1LQ6PCB5 846 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms