RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FOSL2P15408 326 aa10.71□□□□□ -0.69
EXOSC3-206ENST00000489414 ZMYND8Q9ULU4 1186 aaPredicted RBP10.71□□□□□ -0.69
EXOSC3-206ENST00000489414 PRAMEF22A3QJZ6 481 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 INHBEP58166 350 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 ARHGEF6Q15052 776 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 TMEM31Q5JXX7 168 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 LHX8Q68G74 356 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 ATXN2LQ8WWM7 1075 aaKnown RBP10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
EXOSC3-206ENST00000489414 ASTN2O75129 1339 aaPredicted RBP10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 MANSC4A6NHS7 340 aaPredicted RBP10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 NBPF5PQ86XG9 351 aaPredicted RBP10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 ASB2Q96Q27 587 aa10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 TAF1P21675 1872 aa10.69□□□□□ -0.7
EXOSC3-206ENST00000489414 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 RGL2O15211 777 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 SLC12A5Q9H2X9 1139 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 DCHS1Q96JQ0 3298 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
EXOSC3-206ENST00000489414 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 KIF7Q2M1P5 1343 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 NHLH1Q02575 133 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 TCIRG1Q13488 830 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 KIF4BQ2VIQ3 1234 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 CRY2Q49AN0 593 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 U2AF1L4Q8WU68 220 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 EPHX3Q9H6B9 360 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 TERF2IPQ9NYB0 399 aa10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 KMT2BQ9UMN6 2715 aaPredicted RBP10.67□□□□□ -0.7
EXOSC3-206ENST00000489414 KRT37O76014 449 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 SYN1P17600 705 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 TMC1Q8TDI8 760 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 EYA1Q99502 592 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 C11orf16Q9NQ32 467 aa10.66□□□□□ -0.7
EXOSC3-206ENST00000489414 CCL5P13501 91 aa10.65□□□□□ -0.7
EXOSC3-206ENST00000489414 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.7
EXOSC3-206ENST00000489414 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
EXOSC3-206ENST00000489414 ATRXP46100 2492 aa10.65□□□□□ -0.7
EXOSC3-206ENST00000489414 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 GPR37L1O60883 481 aa10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 ANGEL2Q5VTE6 544 aaKnown RBP10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 RNF208Q9H0X6 261 aa10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 TTYH1Q9H313 450 aaPredicted RBP10.64□□□□□ -0.71
EXOSC3-206ENST00000489414 FAM205AQ6ZU69 1335 aa10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 CFAP47Q6ZTR5 3102 aa10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 UNC79Q9P2D8 2635 aa10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 TTLL12Q14166 644 aaPredicted RBP10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 NECAB3Q96P71 396 aaPredicted RBP10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 IGSF5Q9NSI5 407 aa10.63□□□□□ -0.71
EXOSC3-206ENST00000489414 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 PSMD14O00487 310 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 RGS20O76081 388 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 SGPL1O95470 568 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 ZBTB48P10074 688 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 MTHFSP49914 203 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 NUTM1Q86Y26 1132 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 SUPT20HQ8NEM7 779 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 THEGQ9P2T0 379 aa10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 TCF20Q9UGU0 1960 aaKnown RBP10.62□□□□□ -0.71
EXOSC3-206ENST00000489414 ST18O60284 1047 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 PRMT2P55345 433 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 MRPS5P82675 430 aaKnown RBP10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 OTUD7BQ6GQQ9 843 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
EXOSC3-206ENST00000489414 GNRH1P01148 92 aa10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 CAPN2P17655 700 aa10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 IL6STP40189 918 aaPredicted RBP10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 PAWRQ96IZ0 340 aaKnown RBP10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 PTPN18Q99952 460 aa10.6□□□□□ -0.71
EXOSC3-206ENST00000489414 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
EXOSC3-206ENST00000489414 GRK4P32298 578 aa10.59□□□□□ -0.71
EXOSC3-206ENST00000489414 SCARF1Q14162 830 aa10.59□□□□□ -0.71
EXOSC3-206ENST00000489414 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
EXOSC3-206ENST00000489414 ABCC12Q96J65 1359 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 STARD3NLO95772 234 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 SLC39A6Q13433 755 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 KCTD2Q14681 263 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 CLEC4GQ6UXB4 293 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms