RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 PCNTO95613 3336 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
SRRM1-216ENST00000489130 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
SRRM1-216ENST00000489130 CASP7P55210 303 aa16.02■□□□□ 0.16
SRRM1-216ENST00000489130 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
SRRM1-216ENST00000489130 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
SRRM1-216ENST00000489130 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
SRRM1-216ENST00000489130 XDHP47989 1333 aa16.01■□□□□ 0.15
SRRM1-216ENST00000489130 ECE2O60344 883 aa16.01■□□□□ 0.15
SRRM1-216ENST00000489130 UFL1O94874 794 aa16.01■□□□□ 0.15
SRRM1-216ENST00000489130 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
SRRM1-216ENST00000489130 MYH3P11055 1940 aa16.01■□□□□ 0.15
SRRM1-216ENST00000489130 PSMD14O00487 310 aa16■□□□□ 0.15
SRRM1-216ENST00000489130 DOK7Q18PE1 504 aa16■□□□□ 0.15
SRRM1-216ENST00000489130 BEND3Q5T5X7 828 aa16■□□□□ 0.15
SRRM1-216ENST00000489130 DPF2Q92785 391 aa16■□□□□ 0.15
SRRM1-216ENST00000489130 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
SRRM1-216ENST00000489130 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
SRRM1-216ENST00000489130 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
SRRM1-216ENST00000489130 F6X3S4 739 aa15.99■□□□□ 0.15
SRRM1-216ENST00000489130 CSF1RP07333 972 aa15.99■□□□□ 0.15
SRRM1-216ENST00000489130 PGAP2Q9UHJ9 254 aa15.99■□□□□ 0.15
SRRM1-216ENST00000489130 CNOT7Q9UIV1 285 aaKnown RBP15.99■□□□□ 0.15
SRRM1-216ENST00000489130 MINPP1Q9UNW1 487 aa15.99■□□□□ 0.15
SRRM1-216ENST00000489130 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
SRRM1-216ENST00000489130 H7C1D1 291 aa15.98■□□□□ 0.15
SRRM1-216ENST00000489130 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
SRRM1-216ENST00000489130 RPS12P25398 132 aaKnown RBP15.98■□□□□ 0.15
SRRM1-216ENST00000489130 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
SRRM1-216ENST00000489130 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
SRRM1-216ENST00000489130 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
SRRM1-216ENST00000489130 ZC3H15Q8WU90 426 aaKnown RBP15.98■□□□□ 0.15
SRRM1-216ENST00000489130 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
SRRM1-216ENST00000489130 ZNF609O15014 1411 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 RASSF10A6NK89 507 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 E9PSI1 815 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 ITGA6P23229 1130 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
SRRM1-216ENST00000489130 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
SRRM1-216ENST00000489130 IGHMBP2P38935 993 aaKnown RBP15.96■□□□□ 0.15
SRRM1-216ENST00000489130 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
SRRM1-216ENST00000489130 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 G3V3G9 751 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 TRAF5O00463 557 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 HSPA1AP0DMV8 641 aaKnown RBP15.95■□□□□ 0.14
SRRM1-216ENST00000489130 HSPA1BP0DMV9 641 aaKnown RBP15.95■□□□□ 0.14
SRRM1-216ENST00000489130 FOXO4P98177 505 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.14
SRRM1-216ENST00000489130 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
SRRM1-216ENST00000489130 WTIPA6NIX2 430 aaPredicted RBP15.94■□□□□ 0.14
SRRM1-216ENST00000489130 GRM8O00222 908 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 VEGFBP49765 207 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 CCT4P50991 539 aaKnown RBP15.94■□□□□ 0.14
SRRM1-216ENST00000489130 SLFN5Q08AF3 891 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 CST9Q5W186 159 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 PODNQ7Z5L7 613 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
SRRM1-216ENST00000489130 ALDH1L1O75891 902 aa15.93■□□□□ 0.14
SRRM1-216ENST00000489130 EGFRP00533 1210 aa15.93■□□□□ 0.14
SRRM1-216ENST00000489130 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
SRRM1-216ENST00000489130 SAMD7Q7Z3H4 446 aa15.93■□□□□ 0.14
SRRM1-216ENST00000489130 MRPL50Q8N5N7 158 aaKnown RBP15.93■□□□□ 0.14
SRRM1-216ENST00000489130 MPHOSPH8Q99549 860 aa15.93■□□□□ 0.14
SRRM1-216ENST00000489130 GLIS2Q9BZE0 524 aaPredicted RBP15.93■□□□□ 0.14
SRRM1-216ENST00000489130 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
SRRM1-216ENST00000489130 PSME4Q14997 1843 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 DEFB115Q30KQ5 88 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 CDC37L1Q7L3B6 337 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 ANKRD2Q9GZV1 360 aa15.92■□□□□ 0.14
SRRM1-216ENST00000489130 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-216ENST00000489130 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
SRRM1-216ENST00000489130 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-216ENST00000489130 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 GMLQ99445 158 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 C9orf78Q9NZ63 289 aaPredicted RBP15.91■□□□□ 0.14
SRRM1-216ENST00000489130 TLL2Q9Y6L7 1015 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 ZNF804BA4D1E1 1349 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 PTPRCP08575 1304 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 TRPM7Q96QT4 1865 aa15.91■□□□□ 0.14
SRRM1-216ENST00000489130 CHRNDQ07001 517 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 KIF4BQ2VIQ3 1234 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 TRMT2AQ8IZ69 625 aaKnown RBP15.9■□□□□ 0.14
SRRM1-216ENST00000489130 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 UTYO14607 1347 aa15.9■□□□□ 0.14
SRRM1-216ENST00000489130 WDR33Q9C0J8 1336 aaKnown RBP15.9■□□□□ 0.14
SRRM1-216ENST00000489130 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms