RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 U2AF1Q01081 240 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDCD4-209ENST00000489049 NBPF10Q6P3W6 841 aaKnown RBP8.57□□□□□ -1.04
PDCD4-209ENST00000489049 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 ANKLE2Q86XL3 938 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 TCP11L2Q8N4U5 519 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 NBPF15Q8N660 670 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 SCARF2Q96GP6 870 aaPredicted RBP8.57□□□□□ -1.04
PDCD4-209ENST00000489049 COG3Q96JB2 828 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
PDCD4-209ENST00000489049 KRTAP4-6Q9BYQ5 205 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 ROBO2Q9HCK4 1378 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 H7C1W4 665 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 PDE3AQ14432 1141 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 SUZ12Q15022 739 aaKnown RBP8.56□□□□□ -1.04
PDCD4-209ENST00000489049 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 ZNF428Q96B54 188 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
PDCD4-209ENST00000489049 KIF20BQ96Q89 1820 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 SHPRHQ149N8 1683 aa8.56□□□□□ -1.04
PDCD4-209ENST00000489049 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
PDCD4-209ENST00000489049 TNNT2P45379 298 aaPredicted RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 CEBPAP49715 358 aaPredicted RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 WDR44Q5JSH3 913 aa8.55□□□□□ -1.04
PDCD4-209ENST00000489049 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
PDCD4-209ENST00000489049 COL3A1P02461 1466 aaPredicted RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 IQSEC2Q5JU85 1478 aa8.55□□□□□ -1.04
PDCD4-209ENST00000489049 CDK12Q9NYV4 1490 aaPredicted RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 CEP170BQ9Y4F5 1589 aaPredicted RBP8.55□□□□□ -1.04
PDCD4-209ENST00000489049 KIF24Q5T7B8 1368 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 APBB1O00213 710 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 IRX6P78412 446 aaPredicted RBP8.54□□□□□ -1.04
PDCD4-209ENST00000489049 LMOD3Q0VAK6 560 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 CCDC146Q8IYE0 955 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 ENAMQ9NRM1 1142 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
PDCD4-209ENST00000489049 ZNF142P52746 1687 aaPredicted RBP8.53□□□□□ -1.04
PDCD4-209ENST00000489049 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 GNRH1P01148 92 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 TRERF1Q96PN7 1200 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 MON2Q7Z3U7 1717 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 AKAP12Q02952 1782 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 TTC21BQ7Z4L5 1316 aa8.53□□□□□ -1.04
PDCD4-209ENST00000489049 USP31Q70CQ4 1352 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
PDCD4-209ENST00000489049 TMPOP42166 694 aaKnown RBP8.52□□□□□ -1.05
PDCD4-209ENST00000489049 B4GALNT3Q6L9W6 998 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
PDCD4-209ENST00000489049 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 CEP126Q9P2H0 1117 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 USP6P35125 1406 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 PTPRUQ92729 1446 aa8.52□□□□□ -1.05
PDCD4-209ENST00000489049 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 XRN1Q8IZH2 1706 aaKnown RBP8.51□□□□□ -1.05
PDCD4-209ENST00000489049 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 TOPAZ1Q8N9V7 1692 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 TCERG1O14776 1098 aaKnown RBP8.51□□□□□ -1.05
PDCD4-209ENST00000489049 IL2RAP01589 272 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 F11P03951 625 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 BCRP11274 1271 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDCD4-209ENST00000489049 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 CDCA7Q9BWT1 371 aaPredicted RBP8.51□□□□□ -1.05
PDCD4-209ENST00000489049 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
PDCD4-209ENST00000489049 ACEP12821 1306 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
PDCD4-209ENST00000489049 RIMS1Q86UR5 1692 aaKnown RBP8.5□□□□□ -1.05
PDCD4-209ENST00000489049 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
PDCD4-209ENST00000489049 CENPCQ03188 943 aa8.5□□□□□ -1.05
PDCD4-209ENST00000489049 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
PDCD4-209ENST00000489049 SSH2Q76I76 1423 aa8.5□□□□□ -1.05
PDCD4-209ENST00000489049 CENPQQ7L2Z9 268 aaPredicted RBP8.5□□□□□ -1.05
PDCD4-209ENST00000489049 ACDQ96AP0 544 aa8.5□□□□□ -1.05
PDCD4-209ENST00000489049 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
PDCD4-209ENST00000489049 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.5□□□□□ -1.05
PDCD4-209ENST00000489049 IPO8O15397 1037 aaKnown RBP8.49□□□□□ -1.05
PDCD4-209ENST00000489049 IGHA1P01876 353 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 MX2P20592 715 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 IL13P35225 146 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 FOXK2Q01167 660 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 NFE2L2Q16236 605 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 NME9Q86XW9 330 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 HRH3Q9Y5N1 445 aa8.49□□□□□ -1.05
PDCD4-209ENST00000489049 OVOS2A0A0J9YW53 1432 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 OVOS2Q6IE36 1432 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 THBS1P07996 1170 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 KCNA6P17658 529 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 RARSP54136 660 aaKnown RBP8.48□□□□□ -1.05
PDCD4-209ENST00000489049 RIPK4P57078 832 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 ALDH1L2Q3SY69 923 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 NGDNQ8NEJ9 315 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms