RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C8orf34Q49A92 452 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 ZNF438Q7Z4V0 828 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 GLYCTKQ8IVS8 523 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 ABI2Q9NYB9 513 aaPredicted RBP7.11□□□□□ -1.27
RFC4-213ENST00000489028 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 RGS9O75916 674 aaPredicted RBP7.1□□□□□ -1.27
RFC4-213ENST00000489028 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
RFC4-213ENST00000489028 XKR5Q6UX68 686 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 ILDR2Q71H61 639 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 GJD3Q8N144 294 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 C1orf127Q8N9H9 656 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 SMG9Q9H0W8 520 aaKnown RBP7.1□□□□□ -1.27
RFC4-213ENST00000489028 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 FRRS1LQ9P0K9 344 aa7.1□□□□□ -1.27
RFC4-213ENST00000489028 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
RFC4-213ENST00000489028 SOWAHDA6NJG2 315 aa7.09□□□□□ -1.27
RFC4-213ENST00000489028 ELMSAN1Q6PJG2 1045 aa7.09□□□□□ -1.27
RFC4-213ENST00000489028 PLD4Q96BZ4 506 aa7.09□□□□□ -1.27
RFC4-213ENST00000489028 KANSL3Q9P2N6 904 aa7.09□□□□□ -1.27
RFC4-213ENST00000489028 PIK3R2O00459 728 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 KIF4AO95239 1232 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 RPLP1P05386 114 aaKnown RBP7.08□□□□□ -1.28
RFC4-213ENST00000489028 PCSK2P16519 638 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 ATP11AP98196 1134 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 PLA2G4EQ3MJ16 856 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 ADAMTSL4Q6UY14 1074 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
RFC4-213ENST00000489028 TTC9Q92623 222 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 TRAIPQ9BWF2 469 aa7.08□□□□□ -1.28
RFC4-213ENST00000489028 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
RFC4-213ENST00000489028 FOXD3Q9UJU5 478 aaPredicted RBP7.08□□□□□ -1.28
RFC4-213ENST00000489028 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
RFC4-213ENST00000489028 GHRHP01286 108 aa7.07□□□□□ -1.28
RFC4-213ENST00000489028 ACPPP15309 386 aa7.07□□□□□ -1.28
RFC4-213ENST00000489028 HYAL2Q12891 473 aa7.07□□□□□ -1.28
RFC4-213ENST00000489028 BAG6P46379 1132 aa7.06□□□□□ -1.28
RFC4-213ENST00000489028 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
RFC4-213ENST00000489028 CEP120Q8N960 986 aa7.06□□□□□ -1.28
RFC4-213ENST00000489028 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
RFC4-213ENST00000489028 TRIM33Q9UPN9 1127 aa7.06□□□□□ -1.28
RFC4-213ENST00000489028 A0A0A0MRY4 1105 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 EREGO14944 169 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 IGHA2P01877 340 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 CHRNA4P43681 627 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 USP5P45974 858 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 ALYREFQ86V81 257 aaKnown RBP7.05□□□□□ -1.28
RFC4-213ENST00000489028 RASSF4Q9H2L5 321 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 IVNS1ABPQ9Y6Y0 642 aa7.05□□□□□ -1.28
RFC4-213ENST00000489028 SPATA31C1P0DKV0 1188 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 CES1P23141 567 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 GDF6Q6KF10 455 aaPredicted RBP7.04□□□□□ -1.28
RFC4-213ENST00000489028 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 CD163Q86VB7 1156 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 HHIPQ96QV1 700 aa7.04□□□□□ -1.28
RFC4-213ENST00000489028 C1QTNF9BB2RNN3 333 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 PHACTR2O75167 634 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 TRPA1O75762 1119 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 EHHADHQ08426 723 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 KCNA1Q09470 495 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 GRIK4Q16099 956 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 NCAPG2Q86XI2 1143 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 SNX29Q8TEQ0 813 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
RFC4-213ENST00000489028 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 NFKBIEO00221 500 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 GPR182O15218 404 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 NDUFB5O43674 189 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 DEAF1O75398 565 aaPredicted RBP7.02□□□□□ -1.29
RFC4-213ENST00000489028 PROCP04070 461 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 TRIM28Q13263 835 aaKnown RBP7.02□□□□□ -1.29
RFC4-213ENST00000489028 PRRT3Q5FWE3 981 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 WFDC8Q8IUA0 241 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
RFC4-213ENST00000489028 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 RBSNQ9H1K0 784 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
RFC4-213ENST00000489028 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
RFC4-213ENST00000489028 USPL1Q5W0Q7 1092 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 IL22RA1Q8N6P7 574 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 SPACA7Q96KW9 195 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
RFC4-213ENST00000489028 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 ZFYVE28Q9HCC9 887 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
RFC4-213ENST00000489028 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
RFC4-213ENST00000489028 SELPP16109 830 aa7□□□□□ -1.29
RFC4-213ENST00000489028 ORC1Q13415 861 aa7□□□□□ -1.29
RFC4-213ENST00000489028 PEAR1Q5VY43 1037 aaPredicted RBP7□□□□□ -1.29
RFC4-213ENST00000489028 SHISA2Q6UWI4 295 aa7□□□□□ -1.29
RFC4-213ENST00000489028 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
RFC4-213ENST00000489028 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
RFC4-213ENST00000489028 ELNP15502 786 aa6.99□□□□□ -1.29
RFC4-213ENST00000489028 RAC1P63000 192 aa6.99□□□□□ -1.29
RFC4-213ENST00000489028 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
RFC4-213ENST00000489028 RBCK1Q9BYM8 510 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms