RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 RASAL3Q86YV0 1011 aa12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 HDAC9Q9UKV0 1011 aa12.9□□□□□ -0.34
SH3YL1-225ENST00000488979 ANXA1P04083 346 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
SH3YL1-225ENST00000488979 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 TAF1P21675 1872 aa12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
SH3YL1-225ENST00000488979 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 BRCA2P51587 3418 aa12.87□□□□□ -0.35
SH3YL1-225ENST00000488979 HTTP42858 3142 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 GPR25O00155 361 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 ECE2O60344 883 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 GPSM2P81274 684 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 SCARF1Q14162 830 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 SZT2Q5T011 3432 aa12.86□□□□□ -0.35
SH3YL1-225ENST00000488979 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 TM4SF4P48230 202 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 ANGEL2Q5VTE6 544 aaKnown RBP12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 CHPF2Q9P2E5 772 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 DUOX1Q9NRD9 1551 aa12.85□□□□□ -0.35
SH3YL1-225ENST00000488979 DSG3P32926 999 aa12.84□□□□□ -0.35
SH3YL1-225ENST00000488979 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
SH3YL1-225ENST00000488979 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
SH3YL1-225ENST00000488979 LAMB2P55268 1798 aa12.84□□□□□ -0.35
SH3YL1-225ENST00000488979 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
SH3YL1-225ENST00000488979 FKBP1BP68106 108 aa12.83□□□□□ -0.36
SH3YL1-225ENST00000488979 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
SH3YL1-225ENST00000488979 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
SH3YL1-225ENST00000488979 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
SH3YL1-225ENST00000488979 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 EYA3Q99504 573 aa12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
SH3YL1-225ENST00000488979 FKTNO75072 461 aa12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 NOM1Q5C9Z4 860 aaKnown RBP12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
SH3YL1-225ENST00000488979 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
SH3YL1-225ENST00000488979 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 RSBN1LQ6PCB5 846 aaPredicted RBP12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 GMLQ99445 158 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
SH3YL1-225ENST00000488979 COL4A1P02462 1669 aa12.78□□□□□ -0.36
SH3YL1-225ENST00000488979 G3V3G9 751 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms