RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 FOXN1O15353 648 aa23.48■■□□□ 1.35
ATG9A-222ENST00000488833 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
ATG9A-222ENST00000488833 PAXIP1Q6ZW49 1069 aaPredicted RBP23.48■■□□□ 1.35
ATG9A-222ENST00000488833 G2E3Q7L622 706 aa23.48■■□□□ 1.35
ATG9A-222ENST00000488833 PODXL2Q9NZ53 605 aa23.48■■□□□ 1.35
ATG9A-222ENST00000488833 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
ATG9A-222ENST00000488833 SLC4A2P04920 1241 aa23.47■■□□□ 1.35
ATG9A-222ENST00000488833 HIRAP54198 1017 aaPredicted RBP23.47■■□□□ 1.35
ATG9A-222ENST00000488833 CTSWP56202 376 aa23.47■■□□□ 1.35
ATG9A-222ENST00000488833 GLIS2Q9BZE0 524 aaPredicted RBP23.47■■□□□ 1.35
ATG9A-222ENST00000488833 ZC3H12CQ9C0D7 883 aaKnown RBP23.47■■□□□ 1.35
ATG9A-222ENST00000488833 GGA1Q9UJY5 639 aa23.47■■□□□ 1.35
ATG9A-222ENST00000488833 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
ATG9A-222ENST00000488833 WDR33Q9C0J8 1336 aaKnown RBP23.47■■□□□ 1.35
ATG9A-222ENST00000488833 SCN9AQ15858 1988 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 CWF19L2Q2TBE0 894 aaKnown RBP23.46■■□□□ 1.35
ATG9A-222ENST00000488833 CST9Q5W186 159 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 RTL9Q8NET4 1388 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 ZC3H15Q8WU90 426 aaKnown RBP23.46■■□□□ 1.35
ATG9A-222ENST00000488833 DPF2Q92785 391 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 SPEF2Q9C093 1822 aa23.46■■□□□ 1.35
ATG9A-222ENST00000488833 G3V3G9 751 aa23.45■■□□□ 1.34
ATG9A-222ENST00000488833 DCAF8Q5TAQ9 597 aa23.45■■□□□ 1.34
ATG9A-222ENST00000488833 KCNQ5Q9NR82 932 aa23.45■■□□□ 1.34
ATG9A-222ENST00000488833 PGAP2Q9UHJ9 254 aa23.45■■□□□ 1.34
ATG9A-222ENST00000488833 XDHP47989 1333 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 NEURL1BA8MQ27 555 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 CELF2O95319 508 aaKnown RBP23.44■■□□□ 1.34
ATG9A-222ENST00000488833 RPS12P25398 132 aaKnown RBP23.44■■□□□ 1.34
ATG9A-222ENST00000488833 FLIIQ13045 1269 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 CDC5LQ99459 802 aaKnown RBP23.44■■□□□ 1.34
ATG9A-222ENST00000488833 WBP1LQ9NX94 342 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 TLL2Q9Y6L7 1015 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 THSD7BQ9C0I4 1608 aa23.44■■□□□ 1.34
ATG9A-222ENST00000488833 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
ATG9A-222ENST00000488833 CAPN15O75808 1086 aa23.43■■□□□ 1.34
ATG9A-222ENST00000488833 GRM1Q13255 1194 aa23.43■■□□□ 1.34
ATG9A-222ENST00000488833 TBC1D10BQ4KMP7 808 aaPredicted RBP23.43■■□□□ 1.34
ATG9A-222ENST00000488833 UBE3BQ7Z3V4 1068 aa23.43■■□□□ 1.34
ATG9A-222ENST00000488833 CAPNS2Q96L46 248 aa23.43■■□□□ 1.34
ATG9A-222ENST00000488833 ECE1P42892 770 aa23.42■■□□□ 1.34
ATG9A-222ENST00000488833 CTCFP49711 727 aaPredicted RBP23.42■■□□□ 1.34
ATG9A-222ENST00000488833 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
ATG9A-222ENST00000488833 WDR63Q8IWG1 891 aa23.42■■□□□ 1.34
ATG9A-222ENST00000488833 TTLL11Q8NHH1 800 aa23.42■■□□□ 1.34
ATG9A-222ENST00000488833 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
ATG9A-222ENST00000488833 FKBP5Q13451 457 aaPredicted RBP23.41■■□□□ 1.34
ATG9A-222ENST00000488833 CYP4F22Q6NT55 531 aa23.41■■□□□ 1.34
ATG9A-222ENST00000488833 CDC37L1Q7L3B6 337 aa23.41■■□□□ 1.34
ATG9A-222ENST00000488833 GREM2Q9H772 168 aa23.41■■□□□ 1.34
ATG9A-222ENST00000488833 MAP2K1Q02750 393 aaPredicted RBP23.4■■□□□ 1.34
ATG9A-222ENST00000488833 PSME4Q14997 1843 aa23.4■■□□□ 1.34
ATG9A-222ENST00000488833 EGFRP00533 1210 aa23.39■■□□□ 1.33
ATG9A-222ENST00000488833 VIL1P09327 827 aaKnown RBP23.39■■□□□ 1.33
ATG9A-222ENST00000488833 ATP2B4P23634 1241 aa23.39■■□□□ 1.33
ATG9A-222ENST00000488833 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.33
ATG9A-222ENST00000488833 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
ATG9A-222ENST00000488833 USP48Q86UV5 1035 aa23.39■■□□□ 1.33
ATG9A-222ENST00000488833 DNAAF4Q8WXU2 420 aa23.39■■□□□ 1.33
ATG9A-222ENST00000488833 PRDM10Q9NQV6 1147 aa23.39■■□□□ 1.33
ATG9A-222ENST00000488833 H7C1W4 665 aa23.38■■□□□ 1.33
ATG9A-222ENST00000488833 VAMP4O75379 141 aa23.38■■□□□ 1.33
ATG9A-222ENST00000488833 GCKRQ14397 625 aa23.38■■□□□ 1.33
ATG9A-222ENST00000488833 SAPCD2Q86UD0 394 aa23.38■■□□□ 1.33
ATG9A-222ENST00000488833 MYH16Q9H6N6 1097 aa23.38■■□□□ 1.33
ATG9A-222ENST00000488833 KIF4BQ2VIQ3 1234 aa23.37■■□□□ 1.33
ATG9A-222ENST00000488833 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
ATG9A-222ENST00000488833 BSDC1Q9NW68 430 aaPredicted RBP23.37■■□□□ 1.33
ATG9A-222ENST00000488833 POLR2AP24928 1970 aaKnown RBP23.36■■□□□ 1.33
ATG9A-222ENST00000488833 LBX1P52954 281 aa23.36■■□□□ 1.33
ATG9A-222ENST00000488833 KRT26Q7Z3Y9 468 aa23.36■■□□□ 1.33
ATG9A-222ENST00000488833 LINS1Q8NG48 757 aa23.36■■□□□ 1.33
ATG9A-222ENST00000488833 MINPP1Q9UNW1 487 aa23.36■■□□□ 1.33
ATG9A-222ENST00000488833 ZNF609O15014 1411 aa23.35■■□□□ 1.33
ATG9A-222ENST00000488833 IGHMBP2P38935 993 aaKnown RBP23.35■■□□□ 1.33
ATG9A-222ENST00000488833 RSBN1LQ6PCB5 846 aaPredicted RBP23.35■■□□□ 1.33
ATG9A-222ENST00000488833 PLA2G12BQ9BX93 195 aa23.35■■□□□ 1.33
ATG9A-222ENST00000488833 SPINK5Q9NQ38 1064 aaPredicted RBP23.35■■□□□ 1.33
ATG9A-222ENST00000488833 MED23Q9ULK4 1368 aa23.35■■□□□ 1.33
ATG9A-222ENST00000488833 AOC2O75106 756 aa23.34■■□□□ 1.33
ATG9A-222ENST00000488833 HSPA8P11142 646 aaKnown RBP23.34■■□□□ 1.33
ATG9A-222ENST00000488833 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
ATG9A-222ENST00000488833 DLK2Q6UY11 383 aa23.34■■□□□ 1.33
ATG9A-222ENST00000488833 AGBL3Q8NEM8 1001 aa23.34■■□□□ 1.33
ATG9A-222ENST00000488833 DCPSQ96C86 337 aaKnown RBP23.34■■□□□ 1.33
ATG9A-222ENST00000488833 WTIPA6NIX2 430 aaPredicted RBP23.33■■□□□ 1.33
ATG9A-222ENST00000488833 ADM5C9JUS6 153 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 ITGA6P23229 1130 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 CCT4P50991 539 aaKnown RBP23.33■■□□□ 1.33
ATG9A-222ENST00000488833 CASP7P55210 303 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 HHIPL1Q96JK4 782 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 BEGAINQ9BUH8 593 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 GGA3Q9NZ52 723 aa23.33■■□□□ 1.33
ATG9A-222ENST00000488833 PODNQ7Z5L7 613 aa23.32■■□□□ 1.32
ATG9A-222ENST00000488833 USP17L3A6NCW0 530 aa23.31■■□□□ 1.32
ATG9A-222ENST00000488833 USP17L4A6NCW7 530 aa23.31■■□□□ 1.32
ATG9A-222ENST00000488833 F6X3S4 739 aa23.31■■□□□ 1.32
ATG9A-222ENST00000488833 MAP2K2P36507 400 aa23.31■■□□□ 1.32
ATG9A-222ENST00000488833 USP17L1Q7RTZ2 530 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms