RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 LNPKQ9C0E8 428 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 ANKRD18BA2A2Z9 1011 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 TM4SF1P30408 202 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 CTSWP56202 376 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 IFIT5Q13325 482 aaKnown RBP9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 SLC10A5Q5PT55 438 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 KIF1BPQ96EK5 621 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 COPRSQ9NQ92 184 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 PPP1R1BQ9UD71 204 aaPredicted RBP9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 SCN7AQ01118 1682 aa9.34□□□□□ -0.91
APOBEC3A-203ENST00000488758 PNPLA7Q6ZV29 1317 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 SERPINB2P05120 415 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 RFX5P48382 616 aaPredicted RBP9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 CCDC152Q4G0S7 254 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 SKAP1Q86WV1 359 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 SIL1Q9H173 461 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 CARMIL3Q8ND23 1372 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 C4AP0C0L4 1744 aa9.33□□□□□ -0.92
APOBEC3A-203ENST00000488758 CASZ1Q86V15 1759 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 ITGA6P23229 1130 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 ST5P78524 1137 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 CNBD1Q8NA66 436 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 KLHDC4Q8TBB5 520 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 GREM2Q9H772 168 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 TAOK2Q9UL54 1235 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 PARP3Q9Y6F1 533 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 CHD4Q14839 1912 aa9.32□□□□□ -0.92
APOBEC3A-203ENST00000488758 EYA2O00167 538 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 CIAO1O76071 339 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 PDE4AP27815 886 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 IGHMBP2P38935 993 aaKnown RBP9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 SF3B3Q15393 1217 aaKnown RBP9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 C16orf71Q8IYS4 520 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 OCEL1Q9H607 264 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 SPON1Q9HCB6 807 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 IL1RAPL2Q9NP60 686 aa9.31□□□□□ -0.92
APOBEC3A-203ENST00000488758 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 MMP10P09238 476 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 IL15P40933 162 aaPredicted RBP9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 PRR5LQ6MZQ0 368 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 LDHAL6AQ6ZMR3 332 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 CDC5LQ99459 802 aaKnown RBP9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 CNNM1Q9NRU3 951 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 CEP126Q9P2H0 1117 aa9.3□□□□□ -0.92
APOBEC3A-203ENST00000488758 MYH3P11055 1940 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 SASH1O94885 1247 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 DDR1Q08345 913 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 TFCP2Q12800 502 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 LRRC24Q50LG9 513 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 ANKRD18AQ8IVF6 992 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 OTUD5Q96G74 571 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 SEC31BQ9NQW1 1179 aa9.29□□□□□ -0.92
APOBEC3A-203ENST00000488758 TUBGCP6Q96RT7 1819 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 COL24A1Q17RW2 1714 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 RTL9Q8NET4 1388 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 ABCC12Q96J65 1359 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 METTL24Q5JXM2 366 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 ATG9AQ7Z3C6 839 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 AACSQ86V21 672 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 GPATCH3Q96I76 525 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 PDGFDQ9GZP0 370 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
APOBEC3A-203ENST00000488758 MX1P20591 662 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 RPS8P62241 208 aaKnown RBP9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 RPGRQ92834 1020 aaKnown RBP9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 CCDC8Q9H0W5 538 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3A-203ENST00000488758 GPR108Q9NPR9 543 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms