RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 DBNDD1Q9H9R9 158 aa29.47■■■□□ 2.31
CUL4A-209ENST00000488558 ANKIB1Q9P2G1 1089 aa29.47■■■□□ 2.31
CUL4A-209ENST00000488558 GGA1Q9UJY5 639 aa29.47■■■□□ 2.31
CUL4A-209ENST00000488558 XDHP47989 1333 aa29.46■■■□□ 2.31
CUL4A-209ENST00000488558 PSME4Q14997 1843 aa29.46■■■□□ 2.31
CUL4A-209ENST00000488558 RIMBP2O15034 1052 aa29.46■■■□□ 2.31
CUL4A-209ENST00000488558 ZC3H12CQ9C0D7 883 aaKnown RBP29.46■■■□□ 2.31
CUL4A-209ENST00000488558 CNTNAP1P78357 1384 aa29.46■■■□□ 2.31
CUL4A-209ENST00000488558 ECE2O60344 883 aa29.45■■■□□ 2.31
CUL4A-209ENST00000488558 UFL1O94874 794 aa29.45■■■□□ 2.31
CUL4A-209ENST00000488558 CASP7P55210 303 aa29.45■■■□□ 2.31
CUL4A-209ENST00000488558 GREM2Q9H772 168 aa29.45■■■□□ 2.31
CUL4A-209ENST00000488558 TRPM7Q96QT4 1865 aa29.44■■■□□ 2.3
CUL4A-209ENST00000488558 DPF2Q92785 391 aa29.44■■■□□ 2.3
CUL4A-209ENST00000488558 BSDC1Q9NW68 430 aaPredicted RBP29.44■■■□□ 2.3
CUL4A-209ENST00000488558 SCN9AQ15858 1988 aa29.44■■■□□ 2.3
CUL4A-209ENST00000488558 PSMD14O00487 310 aa29.42■■■□□ 2.3
CUL4A-209ENST00000488558 RPS12P25398 132 aaKnown RBP29.42■■■□□ 2.3
CUL4A-209ENST00000488558 ZC3H15Q8WU90 426 aaKnown RBP29.42■■■□□ 2.3
CUL4A-209ENST00000488558 GPR101Q96P66 508 aaPredicted RBP29.42■■■□□ 2.3
CUL4A-209ENST00000488558 MKRN1Q9UHC7 482 aaKnown RBP29.42■■■□□ 2.3
CUL4A-209ENST00000488558 ZNF609O15014 1411 aa29.42■■■□□ 2.3
CUL4A-209ENST00000488558 ATP2B4P23634 1241 aa29.41■■■□□ 2.3
CUL4A-209ENST00000488558 PGAP2Q9UHJ9 254 aa29.41■■■□□ 2.3
CUL4A-209ENST00000488558 CNOT7Q9UIV1 285 aaKnown RBP29.41■■■□□ 2.3
CUL4A-209ENST00000488558 CSF1RP07333 972 aa29.4■■■□□ 2.3
CUL4A-209ENST00000488558 DOK7Q18PE1 504 aa29.4■■■□□ 2.3
CUL4A-209ENST00000488558 BEND3Q5T5X7 828 aa29.4■■■□□ 2.3
CUL4A-209ENST00000488558 H7C1D1 291 aa29.39■■■□□ 2.3
CUL4A-209ENST00000488558 MICALL2Q8IY33 904 aa29.39■■■□□ 2.3
CUL4A-209ENST00000488558 MINPP1Q9UNW1 487 aa29.39■■■□□ 2.3
CUL4A-209ENST00000488558 MED23Q9ULK4 1368 aa29.39■■■□□ 2.29
CUL4A-209ENST00000488558 F6X3S4 739 aa29.38■■■□□ 2.29
CUL4A-209ENST00000488558 ZBTB12Q9Y330 459 aaPredicted RBP29.38■■■□□ 2.29
CUL4A-209ENST00000488558 RASSF10A6NK89 507 aa29.37■■■□□ 2.29
CUL4A-209ENST00000488558 E9PSI1 815 aa29.37■■■□□ 2.29
CUL4A-209ENST00000488558 IGHMBP2P38935 993 aaKnown RBP29.37■■■□□ 2.29
CUL4A-209ENST00000488558 PCNTO95613 3336 aa29.37■■■□□ 2.29
CUL4A-209ENST00000488558 G3V3G9 751 aa29.36■■■□□ 2.29
CUL4A-209ENST00000488558 ITGA6P23229 1130 aa29.36■■■□□ 2.29
CUL4A-209ENST00000488558 HIRAP54198 1017 aaPredicted RBP29.36■■■□□ 2.29
CUL4A-209ENST00000488558 FAM161AQ3B820 660 aa29.36■■■□□ 2.29
CUL4A-209ENST00000488558 DCAF8Q5TAQ9 597 aa29.36■■■□□ 2.29
CUL4A-209ENST00000488558 TRPM4Q8TD43 1214 aa29.36■■■□□ 2.29
CUL4A-209ENST00000488558 VIL1P09327 827 aaKnown RBP29.35■■■□□ 2.29
CUL4A-209ENST00000488558 KCNQ5Q9NR82 932 aa29.35■■■□□ 2.29
CUL4A-209ENST00000488558 HSPA1AP0DMV8 641 aaKnown RBP29.34■■■□□ 2.29
CUL4A-209ENST00000488558 HSPA1BP0DMV9 641 aaKnown RBP29.34■■■□□ 2.29
CUL4A-209ENST00000488558 SHTN1A0MZ66 631 aa29.33■■■□□ 2.29
CUL4A-209ENST00000488558 CCER2I3L3R5 266 aa29.33■■■□□ 2.29
CUL4A-209ENST00000488558 ALDH1L1O75891 902 aa29.33■■■□□ 2.29
CUL4A-209ENST00000488558 CCT4P50991 539 aaKnown RBP29.33■■■□□ 2.29
CUL4A-209ENST00000488558 PODNQ7Z5L7 613 aa29.33■■■□□ 2.29
CUL4A-209ENST00000488558 A0A1B0GUL6 1792 aa29.33■■■□□ 2.29
CUL4A-209ENST00000488558 ZNF646O15015 1829 aaPredicted RBP29.32■■■□□ 2.28
CUL4A-209ENST00000488558 THSD7BQ9C0I4 1608 aa29.32■■■□□ 2.28
CUL4A-209ENST00000488558 TRAF5O00463 557 aa29.32■■■□□ 2.28
CUL4A-209ENST00000488558 ANKRD2Q9GZV1 360 aa29.32■■■□□ 2.28
CUL4A-209ENST00000488558 LEMD3Q9Y2U8 911 aa29.32■■■□□ 2.28
CUL4A-209ENST00000488558 GRM8O00222 908 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 VEGFBP49765 207 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 FOXO4P98177 505 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 DEFB115Q30KQ5 88 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 IFFO2Q5TF58 517 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 MPHOSPH8Q99549 860 aa29.31■■■□□ 2.28
CUL4A-209ENST00000488558 ABT1Q9ULW3 272 aaKnown RBP29.31■■■□□ 2.28
CUL4A-209ENST00000488558 ANKRD18BA2A2Z9 1011 aa29.3■■■□□ 2.28
CUL4A-209ENST00000488558 FMR1Q06787 632 aaKnown RBP eCLIP29.3■■■□□ 2.28
CUL4A-209ENST00000488558 SLFN5Q08AF3 891 aa29.3■■■□□ 2.28
CUL4A-209ENST00000488558 CDC37L1Q7L3B6 337 aa29.3■■■□□ 2.28
CUL4A-209ENST00000488558 AGBL3Q8NEM8 1001 aa29.3■■■□□ 2.28
CUL4A-209ENST00000488558 CST9Q5W186 159 aa29.29■■■□□ 2.28
CUL4A-209ENST00000488558 RSBN1LQ6PCB5 846 aaPredicted RBP29.29■■■□□ 2.28
CUL4A-209ENST00000488558 SAMD7Q7Z3H4 446 aa29.29■■■□□ 2.28
CUL4A-209ENST00000488558 GLIS2Q9BZE0 524 aaPredicted RBP29.29■■■□□ 2.28
CUL4A-209ENST00000488558 SRCIN1Q9C0H9 1055 aa29.29■■■□□ 2.28
CUL4A-209ENST00000488558 PTPRCP08575 1304 aa29.27■■■□□ 2.28
CUL4A-209ENST00000488558 IFIT5Q13325 482 aaKnown RBP29.27■■■□□ 2.28
CUL4A-209ENST00000488558 TBC1D10BQ4KMP7 808 aaPredicted RBP29.27■■■□□ 2.28
CUL4A-209ENST00000488558 MRPL50Q8N5N7 158 aaKnown RBP29.27■■■□□ 2.28
CUL4A-209ENST00000488558 TLL2Q9Y6L7 1015 aa29.27■■■□□ 2.28
CUL4A-209ENST00000488558 ZNF804BA4D1E1 1349 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 USP17L3A6NCW0 530 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 USP17L4A6NCW7 530 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 WTIPA6NIX2 430 aaPredicted RBP29.26■■■□□ 2.27
CUL4A-209ENST00000488558 ZNF280AP59817 542 aaPredicted RBP29.26■■■□□ 2.27
CUL4A-209ENST00000488558 SLC4A10Q6U841 1118 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 USP17L1Q7RTZ2 530 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 COA1Q9GZY4 146 aa29.26■■■□□ 2.27
CUL4A-209ENST00000488558 C9orf78Q9NZ63 289 aaPredicted RBP29.26■■■□□ 2.27
CUL4A-209ENST00000488558 EGFRP00533 1210 aa29.25■■■□□ 2.27
CUL4A-209ENST00000488558 KIF4BQ2VIQ3 1234 aa29.25■■■□□ 2.27
CUL4A-209ENST00000488558 GMLQ99445 158 aa29.25■■■□□ 2.27
CUL4A-209ENST00000488558 CHRNDQ07001 517 aa29.24■■■□□ 2.27
CUL4A-209ENST00000488558 LMBR1LQ6UX01 489 aa29.24■■■□□ 2.27
CUL4A-209ENST00000488558 WDR33Q9C0J8 1336 aaKnown RBP29.23■■■□□ 2.27
CUL4A-209ENST00000488558 CELF2O95319 508 aaKnown RBP29.23■■■□□ 2.27
CUL4A-209ENST00000488558 UTYO14607 1347 aa29.22■■■□□ 2.27
CUL4A-209ENST00000488558 ECE1P42892 770 aa29.22■■■□□ 2.27
CUL4A-209ENST00000488558 EPHA10Q5JZY3 1008 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms