RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 KRT32Q14532 448 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 ANKRD18BA2A2Z9 1011 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 GOLIM4O00461 696 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 CPA1P15085 419 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 ITGA6P23229 1130 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 HSPA1LP34931 641 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 ACSBG1Q96GR2 724 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 GZF1Q9H116 711 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 LMBRD1Q9NUN5 540 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZMYM1Q5SVZ6 1142 aa19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 XAGE2Q96GT9 111 aa19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 GREM2Q9H772 168 aa19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 CCDC9Q9Y3X0 531 aaKnown RBP19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 LRP5O75197 1615 aa19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
RAPGEF3-211ENST00000488250 GOLGA6L3A6NEY3 463 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 ITPK1Q13572 414 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 ANKRD1Q15327 319 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 VPS72Q15906 364 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 RPS6KB1P23443 525 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 LRRFIP1Q32MZ4 808 aaKnown RBP19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 BLOC1S2Q6QNY1 142 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 BCL9LQ86UU0 1499 aa19.13■□□□□ 0.65
RAPGEF3-211ENST00000488250 LDHAL6AQ6ZMR3 332 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 SEC62Q99442 399 aaKnown RBP19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 DSCC1Q9BVC3 393 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 RNF113AO15541 343 aaKnown RBP19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 TTC39AQ5SRH9 613 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 VGLL2Q8N8G2 317 aa19.12■□□□□ 0.65
RAPGEF3-211ENST00000488250 COL5A3P25940 1745 aaPredicted RBP19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 CHGBP05060 677 aa19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 ADORA1P30542 326 aa19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 ATP2B3Q16720 1220 aa19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 METTL24Q5JXM2 366 aa19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 SPATA31A6Q5VVP1 1343 aa19.11■□□□□ 0.65
RAPGEF3-211ENST00000488250 LARGE1O95461 756 aa19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 ZFYP08048 801 aaPredicted RBP19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 GORABQ5T7V8 394 aa19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 CCDC129Q6ZRS4 1044 aa19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 SMC3Q9UQE7 1217 aa19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 TAF6LQ9Y6J9 622 aa19.1■□□□□ 0.65
RAPGEF3-211ENST00000488250 ME3Q16798 604 aa19.09■□□□□ 0.65
RAPGEF3-211ENST00000488250 SUSD4Q5VX71 490 aa19.09■□□□□ 0.65
RAPGEF3-211ENST00000488250 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
RAPGEF3-211ENST00000488250 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
RAPGEF3-211ENST00000488250 CNNM1Q9NRU3 951 aa19.09■□□□□ 0.65
RAPGEF3-211ENST00000488250 RTL9Q8NET4 1388 aa19.08■□□□□ 0.65
RAPGEF3-211ENST00000488250 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.65
RAPGEF3-211ENST00000488250 HSP90B1P14625 803 aaKnown RBP19.08■□□□□ 0.65
RAPGEF3-211ENST00000488250 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.65
RAPGEF3-211ENST00000488250 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.65
RAPGEF3-211ENST00000488250 MAST3O60307 1309 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 RGL2O15211 777 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 PDE8BO95263 885 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 CYP21A2P08686 494 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 ST3GAL1Q11201 340 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 NEK1Q96PY6 1258 aa19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 LARP6Q9BRS8 491 aaKnown RBP19.08■□□□□ 0.64
RAPGEF3-211ENST00000488250 MROH5Q6ZUA9 1318 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 A0A0G2JS52 829 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 KCNQ2O43526 872 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 PRPF40AO75400 957 aaKnown RBP19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 MRE11P49959 708 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 TOB2Q14106 344 aaPredicted RBP19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 CCDC83Q8IWF9 413 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 NGLY1Q96IV0 654 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 LAMB2P55268 1798 aa19.07■□□□□ 0.64
RAPGEF3-211ENST00000488250 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 STX6O43752 255 aa19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 SYT1P21579 422 aa19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 FKBP4Q02790 459 aaKnown RBP eCLIP19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 COL9A3Q14050 684 aaPredicted RBP19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 HMGB1P09429 215 aaKnown RBP19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 ZSCAN22P10073 491 aaPredicted RBP19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 HSPD1P10809 573 aaKnown RBP19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 CLEC4GQ6UXB4 293 aa19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 C8orf37Q96NL8 207 aa19.06■□□□□ 0.64
RAPGEF3-211ENST00000488250 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 NTSR2O95665 410 aa19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 SCARF1Q14162 830 aa19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 FOXD4L5Q5VV16 416 aaPredicted RBP19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 FBXO41Q8TF61 875 aa19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 FOXD4L4Q8WXT5 416 aaPredicted RBP19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 ZNF652Q9Y2D9 606 aa19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 DDX60Q8IY21 1712 aaKnown RBP19.05■□□□□ 0.64
RAPGEF3-211ENST00000488250 XRCC6P12956 609 aaKnown RBP eCLIP19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 FGFR2P21802 821 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 GJB2P29033 226 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 ZAP70P43403 619 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms