RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ELOA3CA0A087WX78 387 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ELOA3DA6NLF2 546 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 EREGO14944 169 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 GPLD1P80108 840 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ATP2B2Q01814 1243 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 MAP3K10Q02779 954 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 FMR1Q06787 632 aaKnown RBP eCLIP6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 HYAL2Q12891 473 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 DSC3Q14574 896 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ELOA3BQ3SY89 546 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 EAPPQ56P03 285 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 HFE2Q6ZVN8 426 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 GALNT6Q8NCL4 622 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ELOA3Q8NG57 546 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 TRPM4Q8TD43 1214 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 DNAJC25Q9H1X3 360 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ZFYVE28Q9HCC9 887 aa6.68□□□□□ -1.34
ECHDC1-217ENST00000488087 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 ZBTB42B2RXF5 422 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 J3QW42 95 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 GHRHP01286 108 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 POLR3DP05423 398 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 BCRP11274 1271 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 CPB1P15086 417 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 EIF2AK2P19525 551 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 FAM35AQ86V20 835 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 EDARADDQ8WWZ3 215 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 RBSNQ9H1K0 784 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 CHRDQ9H2X0 955 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 SLC6A14Q9UN76 642 aa6.67□□□□□ -1.34
ECHDC1-217ENST00000488087 LOC102724428A0A0B4J2F2 783 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 OIP5O43482 229 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 EPXP11678 715 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 EDN3P14138 238 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 AMPD1P23109 780 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 SIK1P57059 783 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 USPL1Q5W0Q7 1092 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 LYPD4Q6UWN0 246 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 MICALL1Q8N3F8 863 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
ECHDC1-217ENST00000488087 LDHBP07195 334 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 HOXD8P13378 290 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 COL19A1Q14993 1142 aa6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 ENOX2Q16206 610 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 COL13A1Q5TAT6 717 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 ELMSAN1Q6PJG2 1045 aa6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 C1orf229Q6ZS94 237 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 WHAMMQ8TF30 809 aa6.65□□□□□ -1.34
ECHDC1-217ENST00000488087 KIF4AO95239 1232 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 IRS1P35568 1242 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 PSAPL1Q6NUJ1 521 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 KANK3Q6NY19 840 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 FOXD4L4Q8WXT5 416 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 NPHS2Q9NP85 383 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 ENAMQ9NRM1 1142 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 SALL4Q9UJQ4 1053 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-217ENST00000488087 SHISA8B8ZZ34 492 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 FGD1P98174 961 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 PERM1Q5SV97 790 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 ZNF385CQ66K41 422 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 ALG1LQ6GMV1 187 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 CHSY3Q70JA7 882 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 GALNT12Q8IXK2 581 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 RGS22Q8NE09 1264 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 GIPC2Q8TF65 315 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 NUDT8Q8WV74 236 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 SETDB2Q96T68 719 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 LRRC4BQ9NT99 713 aa6.63□□□□□ -1.35
ECHDC1-217ENST00000488087 PRPF40AO75400 957 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 RGS9O75916 674 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 EPS8L3Q8TE67 593 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 FBF1Q8TES7 1133 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 PLD4Q96BZ4 506 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 OSMRQ99650 979 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 MDFIQ99750 246 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 RRAGCQ9HB90 399 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 JPH1Q9HDC5 661 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 LATS2Q9NRM7 1088 aa6.62□□□□□ -1.35
ECHDC1-217ENST00000488087 ACPPP15309 386 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 ATP11AP98196 1134 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 CEP135Q66GS9 1140 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 FBXO33Q7Z6M2 555 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms